DRSC/TRiP Functional Genomics Resources

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Protein Alignment hng3 and CG10949

DIOPT Version :9

Sequence 1:NP_612057.1 Gene:hng3 / 38090 FlyBaseID:FBgn0035160 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_001286101.1 Gene:CG10949 / 35310 FlyBaseID:FBgn0032858 Length:459 Species:Drosophila melanogaster


Alignment Length:431 Identity:82/431 - (19%)
Similarity:144/431 - (33%) Gaps:132/431 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDMHRLIFEVQQRRALWDARHPDHANRPETQRLWNAVAEATGMDVELCRTKWKNLRCSYRRSNRR 65
            ::.|.::::....|::.:|...|.|        |.|:::..|.....|.|:||::|..:.:..||
  Fly    10 IERHPILYDKDCARSVKNAAQKDAA--------WKAISQKLGASERACITRWKSIRDRFGKEFRR 66

  Fly    66 SGILKHQQSPSPGHQWSYAEAMSF--------------LDGQR-------------EECDNSNNG 103
                 .|:.|.....|.....:.|              |||.|             .|.:.....
  Fly    67 -----FQERPDEPTYWDMFPRLLFLKDHYKQGLARNESLDGMRFEPRERKKRTKVDMEQERRRKD 126

  Fly   104 EEEMES--------ALKIEAEHMPMLSTFK-----------------SEQVSAADEM-----EAD 138
            |||.:|        .:::...|..:....|                 ||.::.::|:     :..
  Fly   127 EEEEDSQDDLLNEQLIELVKSHPVLYDRHKIRVSKNLAAKNEAWREISENLNVSEELCYNRWKKL 191

  Fly   139 NDALMREFQ----NVSTPQALRRLS-----------------ENISLASAAAEEQVPSTADQLSP 182
            .|...|||:    |.|||...|..:                 |||.......:...||......|
  Fly   192 RDRFGREFRSHQINQSTPITWRYFNDLLFLGRHFRKGVPLVLENIKRRGRPPKAGNPSGKTSKQP 256

  Fly   183 N---LNQGSAIAAA----------AASSCHCAKRVDEQVNFLESLER-----------------E 217
            .   ::.|..|..|          .......|  .||::..|...|:                 |
  Fly   257 EGMVISSGEQIWGADYPYSTDNDDLEDDLELA--YDEEIEILSEAEQATPYDFILSEATARQDLE 319

  Fly   218 EQQLMQSTSQDLARCKSVLHVGDSDYNYLISFLPLMKQMT--PFQNVFFRAKMGELLLQTMQQPP 280
            ..|.:|.|:...|..:.::|.       :....|::::.:  |..:|...|...:||...:....
  Fly   320 PPQQLQVTTTTPATSEEIIHT-------IARVNPVVEESSSLPGDSVPSAAISDKLLTTVIANME 377

  Fly   281 VQQQPQQQQQLQLQLQQQPEQRQQQQQPSQMLLNQQQMALD 321
            ...|..::.|.|:..:|:.|:.|:..||:..||.:.||.||
  Fly   378 TVLQQSRELQAQIHHEQEQEREQRSTQPANSLLAKAQMLLD 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hng3NP_612057.1 MADF 5..91 CDD:214738 18/99 (18%)
BESS 240..274 CDD:281011 6/35 (17%)
CG10949NP_001286101.1 MADF 5..91 CDD:214738 19/93 (20%)
MADF 140..226 CDD:214738 14/85 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D98646at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

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