DRSC/TRiP Functional Genomics Resources

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Protein Alignment hng3 and madf-4

DIOPT Version :10

Sequence 1:NP_612057.1 Gene:hng3 / 38090 FlyBaseID:FBgn0035160 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_505565.3 Gene:madf-4 / 179386 WormBaseID:WBGene00011575 Length:329 Species:Caenorhabditis elegans


Alignment Length:357 Identity:67/357 - (18%)
Similarity:125/357 - (35%) Gaps:104/357 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LIFEVQQRRALWDARHPDHANRPETQRLWNAVAEATGMD---VELCRTKWKNLRCSYRRSNRRSG 67
            ||..||:...:::...|.|........:|..::...|.|   |||.| |||::|..|.|..::. 
 Worm    22 LIDSVQRNPCVYNRYDPLHKVTDYKHEIWKLISIEIGYDGQPVELER-KWKHMRDKYVRLRKQD- 84

  Fly    68 ILKHQQSP-SPGHQW-SYAEAMSFLDGQREECDNSNNGEEEMESALKIEAEHMPMLSTFKSEQVS 130
               .|::| ...::| :|...|||||..                     .||.            
 Worm    85 ---KQKAPIKKTNKWYNYYHKMSFLDPY---------------------VEHR------------ 113

  Fly   131 AADEMEADNDALMREFQNVSTPQAL---RRLSENISLASAAAEEQVPSTAD--QLSPNLNQGSAI 190
                    |....:::.|.:||..|   ....:.:|:......|.:.::.|  ..||:....|:.
 Worm   114 --------NRKRQKDYLNSNTPDFLDDDTAFLDGLSVKEMLKPESLLTSNDAGYNSPHTTSSSSS 170

  Fly   191 AAAAASSCHCAKRVDEQVNFLES----LEREEQQLMQSTSQDLARCKSVLHVGDSDYNYLISFLP 251
            :.:           :....||:|    :|.:::.|.      |...|.|.:..:::.|:..|...
 Worm   171 SGS-----------NNNGRFLDSPTIDIEDDKKNLA------LIYDKFVANQTENEKNHRFSNKH 218

  Fly   252 LMKQMTPFQNVFFRAKMGELLLQTMQQP---------PVQ----QQPQQQQQLQLQLQQQPEQRQ 303
            ....:....|...     |.|..|...|         |||    ..|.|::..:::|.:......
 Worm   219 GKDLLFSTTNTLI-----EKLATTSTAPSSSRKRKPIPVQILPSSPPPQEKNTKIELLEDILNEP 278

  Fly   304 QQQQPSQML---------LNQQQMALDQAQVS 326
            .:.|.|..:         |::::.|:.:.::|
 Worm   279 NEDQVSLFVRSIARTLNDLDREKFAMARVEIS 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hng3NP_612057.1 MADF 5..91 CDD:214738 26/89 (29%)
BESS 240..274 CDD:460758 5/33 (15%)
madf-4NP_505565.3 MADF 22..111 CDD:214738 28/114 (25%)

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