DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13895 and cag

DIOPT Version :10

Sequence 1:NP_001261220.1 Gene:CG13895 / 38087 FlyBaseID:FBgn0035158 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_477207.1 Gene:cag / 36157 FlyBaseID:FBgn0017414 Length:225 Species:Drosophila melanogaster


Alignment Length:195 Identity:38/195 - (19%)
Similarity:82/195 - (42%) Gaps:30/195 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 RNVLTLEERVAAIRQYDIVPMYSK-IARNFNCSWEQIKSIVSNREAILEFHKATNRLSQPANKDA 89
            |..|||||::..|:..:...:..: :|:.||....|...|:.::::|.|      .|.....|..
  Fly    10 RTSLTLEEKMEVIQSQERNKLSVRDLAKRFNIGKTQAADILKHKQSIKE------GLLSGELKLN 68

  Fly    90 ELRRRKLNFLG----HCLYEYIQRAQFYLHSDVNEEMIRNRAIEFRDLMQLDGFVPNKPWINHFK 150
            ::||..|:..|    ...:::..|.:.. :..::.||:|.:|.:....:....|..:..|:..::
  Fly    69 QMRRNPLSQRGAQIDEMCFDWFSRVRTE-NIPISGEMVRKKAKQLAVELGHSNFSASSGWLEKWR 132

  Fly   151 AAYNITLSNRQITIVRRPPRSMDLRDIMSYCGRHTSMS----CSLAPRSPEPALTSSDRPLYRTK 211
            ..:|:..::        ...|:||::..:...:...:|    |.      ||...:...|:|.|:
  Fly   133 KRHNVRYND--------TGDSLDLQEFEAILVKSEPISNKDDCD------EPYPVTLIEPIYSTE 183

  Fly   212  211
              Fly   184  183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13895NP_001261220.1 CENP-B_N 24..74 CDD:461229 13/48 (27%)
CENPB 93..159 CDD:197828 11/69 (16%)
CENPB 232..298 CDD:197828
cagNP_477207.1 CENP-B_N 7..56 CDD:461229 12/45 (27%)
CENPB 78..141 CDD:197828 9/63 (14%)
Blue background indicates that the domain is not in the aligned region.

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