DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13895 and Tigd3

DIOPT Version :10

Sequence 1:NP_001261220.1 Gene:CG13895 / 38087 FlyBaseID:FBgn0035158 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_941036.1 Gene:Tigd3 / 332359 MGIID:2681860 Length:470 Species:Mus musculus


Alignment Length:108 Identity:22/108 - (20%)
Similarity:35/108 - (32%) Gaps:38/108 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 FLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTI---------------- 114
            ||..|:....|||         |.......|.::|.|....|:|..:::                
Mouse    51 FLAAMFVFTLWVM---------LQTLNDDTPKYRDRVASPGLVIRPNSLNIEFNRSDPLEYGQYV 106

  Fly   115 ----SFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAIL 153
                ||:.:.|....|         |..:...|::|||:...|
Mouse   107 QHLESFLHQYNDSEQA---------KNDLCMAGQYSEQDGESL 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13895NP_001261220.1 CENP-B_N 24..74 CDD:461229 3/7 (43%)
CENPB 93..159 CDD:197828 15/81 (19%)
CENPB 232..298 CDD:197828
Tigd3NP_941036.1 CENP-B_N 6..57 CDD:461229 3/5 (60%)
HTH_Tnp_Tc5 76..133 CDD:460850 10/65 (15%)
DDE_3 193..360 CDD:481203
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 402..426
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.