DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13895 and tigd3

DIOPT Version :10

Sequence 1:NP_001261220.1 Gene:CG13895 / 38087 FlyBaseID:FBgn0035158 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_001128294.1 Gene:tigd3 / 100135169 XenbaseID:XB-GENE-6457180 Length:595 Species:Xenopus tropicalis


Alignment Length:608 Identity:113/608 - (18%)
Similarity:194/608 - (31%) Gaps:189/608 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 NSNGSH---RIRNVLTLEERVAAIRQYDIVPM----YSKIARNFNCSWEQIKSIVSNREAILEFH 75
            |...||   :.|...||.|:|..:   :::..    .|.:|||...|...|..::.|||.|:|  
 Frog     9 NPGASHQPFKKRRDSTLAEKVKIL---ELLQQPKASQSSVARNLGLSQSTISRVMKNREEIME-- 68

  Fly    76 KATNRLSQPANKDAELRRRKLNF--LGHCLYEYIQRAQFYLHSDVNE-----EMIRNRAIEFRDL 133
             ..|:...||.|    |.|....  :...|.|::      |.:..|:     .::..||......
 Frog    69 -RWNQNENPARK----RNRPFKHAKVDEALLEWL------LFAKANKLPISGPILMRRAEAIAKE 122

  Fly   134 MQLDGFVPNKPWINHFKAAYNITLSNRQITIVRRPPRSMDLRDI----MSYCGRHTSMSCSLAPR 194
            :....|.|:..|:..:|..|.: ....::...:|....:..:|:    ::| .:.|:....|...
 Frog   123 IGCPQFKPSNGWLWRWKERYRL-FYRTEVLPCQRSGMILQGQDVPESEIAY-DKVTAKGYCLGAN 185

  Fly   195 SPEPALTSS---DR-----PLYRTKTL---------------VTTSSQNQATSDEVHLRRKRKLA 236
            .....||.|   ||     |..|:.||               :.:..|.:|.:.:..:...:|.:
 Frog   186 ERSEVLTRSEFHDRSSQGCPRNRSLTLAQVAKEYHSQDIFCGIESPFQFRAMAGQGFMSEHKKES 250

  Fly   237 FLEKCVYEYIQRSQLVRQGRLDLDNLRFVAISLRDILKIDSFFPDKVWLKHFKSRYNFNFTVGVQ 301
            .   |::.....:...:...|...||...:|....:..:           ..|..:|...|.|:.
 Frog   251 V---CIWFCCNMNGTEKLKLLVTHNLPAKSIGANSLSPV-----------FLKLSHNGYLTEGLL 301

  Fly   302 V------------TNRRLPLSL---------DLRDIVSYC--GRNEHKITLDHKKSQEELSQ--- 340
            :            .:|::.|.|         .||:| |.|  .:|.......|...||.:|:   
 Frog   302 IEWLLTWDSKLARQDRKVLLFLMAHSTVPKVKLRNI-SLCLFPKNNTNTPSSHLFGQELISEFNA 365

  Fly   341 ----------SDKPEVDQ------------------------------------CPQVEPKPEEF 359
                      .:.|.|.:                                    |.|.....:.|
 Frog   366 LYKQLLLDRFQEDPNVSRGSGVSFLRQLSHLSLVEASYTMNKAWLRISSYTIKNCFQKILSTQAF 430

  Fly   360 EHEEDDDCVAIEVPPELIEIKDDEDNDDEHNDNEDLP----ERATKRKSDENGGPIPCGLKIQKI 420
                   |.|...|..||             .|:|||    :.||:..  .|.||...||...:.
 Frog   431 -------CSARPQPTSLI-------------PNKDLPTLMLQGATENL--HNYGPFTAGLGTYRK 473

  Fly   421 QSLNESLPEDTELLPANSPGHYSETSDEAHLPRCVESYKDALRLLKPLEEF----VLMEENYRAI 481
            .::.|....:.|           |..||........||  .::.::..|:.    |..|.|....
 Frog   474 VTIKEECVVEQE-----------EEDDEFEASSSYLSY--PIQKVEDNEDMVHGGVKTERNCFDP 525

  Fly   482 GLLTQLEKIFESAAKKSEEMDKS 504
            .:.|:.:|:..:...|||.::.|
 Frog   526 CVTTKDKKMASAVGIKSEVLEDS 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13895NP_001261220.1 CENP-B_N 24..74 CDD:461229 15/53 (28%)
CENPB 93..159 CDD:197828 12/72 (17%)
CENPB 232..298 CDD:197828 8/65 (12%)
tigd3NP_001128294.1 Csa3 18..>138 CDD:442641 31/135 (23%)
CENPB 83..147 CDD:197828 11/70 (16%)
DDE_3 248..421 CDD:481203 25/187 (13%)

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