DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13894 and Thap2

DIOPT Version :10

Sequence 1:NP_612054.1 Gene:CG13894 / 38086 FlyBaseID:FBgn0035157 Length:528 Species:Drosophila melanogaster
Sequence 2:NP_001381922.1 Gene:Thap2 / 688019 RGDID:1593643 Length:217 Species:Rattus norvegicus


Alignment Length:273 Identity:58/273 - (21%)
Similarity:96/273 - (35%) Gaps:95/273 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPTIRRCCIIGCLSNSRQHPSMQFFAFP-RPENPFHKLWKEACHASLRRIVPFKKPVVCALHFDP 64
            |||  .|...||.:...:|.::.|..|| .|:.  .|.|......  :..||.|...:|:.||:.
  Rat     1 MPT--NCAAAGCAATYNKHINISFHRFPLDPKR--RKEWVRLVRR--KNFVPGKHTFLCSKHFEA 59

  Fly    65 SV--LGG--RRLQSNALPT----------LRLEV--------------PSNLEA-VEQQAMVEEI 100
            |.  |.|  |||:.:|:||          |:|:.              |.||:. ..||.::|  
  Rat    60 SCFDLTGQTRRLKMDAVPTIFDFCTHIKSLKLKSRNLLKKSNSFTSAGPCNLKLNSSQQVLLE-- 122

  Fly   101 ERSRKCAYINAVVYEWLVRANINPQLR--------GSITHGMIKDKAENARQVIGSTSFIADNRW 157
                         :.:..|:.:..:.|        .|:...| |...:..|:        |..||
  Rat   123 -------------HSYAFRSPVEAKKRIIKLEREIASLRRKM-KTCLQRERR--------ATRRW 165

  Fly   158 LNRFRETHLQGFAQKLASNQLKPLGSSLWIPDIVQDLAHLFPPASAERVAKLEEMPEQYMTYMQQ 222
            :.      ...|.:.|.:..:.|.|.|          ..:.|.|       |..:|.:.:..:||
  Rat   166 IK------ATCFVKSLEAGNMLPKGIS----------EQILPTA-------LSSLPLENLKILQQ 207

  Fly   223 YGEYEEDDDSMDV 235
                ::.|.::.|
  Rat   208 ----DQQDKTLPV 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13894NP_612054.1 THAP 6..82 CDD:214951 26/90 (29%)
CENPB 104..165 CDD:197828 9/68 (13%)
Thap2NP_001381922.1 THAP 5..80 CDD:461662 25/78 (32%)

Return to query results.
Submit another query.