DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13894 and zgc:113019

DIOPT Version :10

Sequence 1:NP_612054.1 Gene:CG13894 / 38086 FlyBaseID:FBgn0035157 Length:528 Species:Drosophila melanogaster
Sequence 2:XP_073790636.1 Gene:zgc:113019 / 550590 ZFINID:ZDB-GENE-050417-449 Length:530 Species:Danio rerio


Alignment Length:118 Identity:26/118 - (22%)
Similarity:40/118 - (33%) Gaps:42/118 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IRRCCIIGCLSNSRQHPS-MQFFAFPRPENPFHKLWKEAC----------------------HAS 45
            :..||::.|...:.:..: ::||.||        .||:..                      |.|
Zfish    25 VNSCCVLNCRHRTHERRNGVRFFHFP--------TWKQGYGPQVSELSKRRRMAWIAAVRLKHIS 81

  Fly    46 LRRIVPFKKPVVCALHFDPSVLGGRRLQSNA--LPTLRL---EV----PSNLE 89
            ...|.  :..|||:.||.........|:.:.  .|:|.|   ||    ||..|
Zfish    82 FNNIP--RHMVVCSRHFHKGKPAYEMLECDPDWAPSLHLGHSEVKATKPSRFE 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13894NP_612054.1 THAP 6..82 CDD:214951 20/100 (20%)
CENPB 104..165 CDD:197828
zgc:113019XP_073790636.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.