DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13894 and Thap1

DIOPT Version :10

Sequence 1:NP_612054.1 Gene:CG13894 / 38086 FlyBaseID:FBgn0035157 Length:528 Species:Drosophila melanogaster
Sequence 2:NP_001008341.1 Gene:Thap1 / 306547 RGDID:1307589 Length:210 Species:Rattus norvegicus


Alignment Length:101 Identity:28/101 - (27%)
Similarity:42/101 - (41%) Gaps:15/101 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IRRCCIIGCLSNSRQHPSMQFFAFPRPENPFHKLWKEACHASLRR--IVPFKKPVVCALHFDPSV 66
            ::.|...||.:...:...:.|..||.......|.|:    |::||  ..|.|...:|:.||.|..
  Rat     2 VQSCSAYGCKNRYDKDKPVSFHKFPLTRPSLCKQWE----AAVRRKNFKPTKYSSICSEHFTPDC 62

  Fly    67 L----GGRRLQSNALPTLRL-----EVPSNLEAVEQ 93
            .    ..:.|:.||:||:.|     |....||..||
  Rat    63 FKRECNNKLLKENAVPTIFLYIEPHEKKEELEPQEQ 98

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13894NP_612054.1 THAP 6..82 CDD:214951 22/81 (27%)
CENPB 104..165 CDD:197828
Thap1NP_001008341.1 THAP 4..82 CDD:214951 22/81 (27%)
HCFC1-binding motif (HBM). /evidence=ECO:0000250 131..134
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.