DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Vti1a and VTI13

DIOPT Version :9

Sequence 1:	NP_612053.1	Gene:	Vti1a / 38085	FlyBaseID:	FBgn0260862	Length:	230	Species:	Drosophila melanogaster
Sequence 2:	NP_001327544.1	Gene:	VTI13 / 822557	AraportID:	AT3G29100	Length:	221	Species:	Arabidopsis thaliana

Alignment Length:	221	Identity:	69/221 - (31%)
Similarity:	117/221 - (52%)	Gaps:	18/221 - (8%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 EQYEQQYATLIAEIT-------AHIGRLQQQNNNSERHDLCSKIDSSLPEAQELLEQMGLEVREL 62
            |:||:||..:.|.::       |..|..::||        .|:|.|.:.||:.|:::|.||.|.|
plant     6 ERYERQYCEISANLSKKCTSAIALDGEQKKQN--------LSEIKSGVEEAEALVKKMDLEARNL 62

  Fly    63 NPGLRSSFNGKLQVAQAELKRLQAEY-RLTKDKQRSQANTFTTLDLGDSYEDVSISTDQRQRLLD 126
            .|.::||...||:..:::|...:.|. |:|.....:.|.. ..|:.|.: :.::.|.|||.||:.
plant    63 PPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARD-ELLEAGMA-DTLTASADQRSRLMM 125

  Fly   127 NSERIERTGNRLTEGYRVALETEQLGAQVLNDLHHQRETLQGARARLRETNAELGRASRTLNTMM 191
            :::.:.||.:|:.:..|..||||:||..:|.|||.||::|..|...|...:..:|::.:.|.||.
plant   126 STDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHETLHGVDDNVGKSKKILTTMT 190

  Fly   192 LRALREKVVLYGVGVCFVVAVGVSLY 217
            .|..|.|..:..:....|:|:...||
plant   191 RRMNRNKWTIGAIITVLVLAIIFILY 216

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Vti1a	NP_612053.1	V-SNARE	11..89	CDD:282816	24/85 (28%)
Vti1a	NP_612053.1	SNARE_Vti1a	128..189	CDD:277244	21/60 (35%)
VTI13	NP_001327544.1	V-SNARE	12..90	CDD:368237	24/85 (28%)
VTI13	NP_001327544.1	SNARE_Vti1	127..188	CDD:277215	21/60 (35%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	50	1.000	Domainoid score	I4359
eggNOG	1	0.900	-	-		E1_KOG1666
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H39963
Inparanoid	1	1.050	102	1.000	Inparanoid score	I2155
OMA	1	1.010	-	-		QHG54893
OrthoDB	1	1.010	-	-		D1195966at2759
OrthoFinder	1	1.000	-	-		FOG0003233
OrthoInspector	1	1.000	-	-		otm2538
orthoMCL	1	0.900	-	-		OOG6_101479
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	12	11.740