Protein Alignment Vti1a and Vti1b

DIOPT Version :9

• Sequence 1: NP_612053.1
• Gene: Vti1a / 38085
• FlyBaseID: FBgn0260862
• Length: 230
• Species: Drosophila melanogaster
• Sequence 2: NP_001138075.1
• Gene: Vti1b / 42215
• FlyBaseID: FBgn0264751
• Length: 122
• Species: Drosophila melanogaster
• Alignment Length: 118
• Identity: 31/118 - (26%)
• Similarity: 59/118 - (50%)
• Gaps: 10/118 - (8%)

  Fly   111 YEDVSISTDQRQR----LLDNSERIERTGNRLTEGYRVALETEQLGAQVLNDLHHQRETLQGARA 171
            |..:...:||.:|    .....:.::||.:.:....::|:|||.:||:||.:|..|||:|.....
  Fly     6 YSQLPSGSDQERRQAQLAASTYDVLQRTTDSIQRSNQIAIETENMGAEVLGELGEQRESLLRTTR 70

  Fly   172 RLRETNAELGRASRTLNTMMLRALREKVVLYGVGVCFVVAVGV---SLYLTFA 221
            ||.:.:.:|.::...:..:....|..|::|.   :..::.||:   .|.|.||
  Fly    71 RLEDADQDLSKSRVIIRKLSREVLYNKIILI---LIIILEVGILVGLLVLKFA 120

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vti1a	NP_612053.1	V-SNARE	11..89	CDD:282816
		SNARE_Vti1a	128..189	CDD:277244	18/60 (30%)
Vti1b	NP_001138075.1	SNARE_Vti1b	27..88	CDD:277243	18/60 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45443431
Domainoid	1	1.000	50	1.000	Domainoid score	I4359
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.840