Protein Alignment Vti1a and vti1b

DIOPT Version :10

• Sequence 1: NP_612053.1
• Gene: Vti1a / 38085
• FlyBaseID: FBgn0260862
• Length: 230
• Species: Drosophila melanogaster
• Sequence 2: NP_957330.1
• Gene: vti1b / 394011
• ZFINID: ZDB-GENE-040426-1148
• Length: 225
• Species: Danio rerio
• Alignment Length: 224
• Identity: 61/224 - (27%)
• Similarity: 104/224 - (46%)
• Gaps: 16/224 - (7%)

  Fly     5 EQYEQQYATLIAEITAHIGRLQQQNNNSERHDLCSKIDSSLPEAQELLEQMGLEVRELNPGLRSS 69
            |:..:.|.:|..|:.....|: |::...||..:....|..:.||:|:|:.|..|:.......|:.
Zfish     7 EKLHEMYKSLYDEVKLMPERV-QKSQGEERKRIVRDFDERVSEAEEVLQGMEQELFGAPSSFRTP 70

  Fly    70 FNGKLQVAQAELKRLQAEYRLTKDKQRSQANTFTTLDLGDSYEDVSISTD--------QRQRLLD 126
            .:.|:::.:.:|.:||.:.||:       |....|..||||...|..|.:        ||..|:.
Zfish    71 MSTKIRLYRRDLAKLQRDIRLS-------ATPGLTGQLGDSRLGVYASQNDQSTHLQSQRALLIQ 128

  Fly   127 NSERIERTGNRLTEGYRVALETEQLGAQVLNDLHHQRETLQGARARLRETNAELGRASRTLNTMM 191
            .:|.:......:....|:|.||:|:|..::.:|..|||.|...|.||..|...|.|:.:.|..|.
Zfish   129 GTESLNNASKSIERSQRIAAETDQIGTDIIEELGEQREQLDRTRDRLVNTGENLSRSRKILRAMS 193

  Fly   192 LRALREKVVLYGVGVCFVVAVGVSLYLTF 220
            .|.:..|::|..:.:..|..:|..:||.|
Zfish   194 RRIVTNKLLLSIIIIMEVAILGGVVYLKF 222

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vti1a	NP_612053.1	V-SNARE	11..89	CDD:461516	19/77 (25%)
		SNARE_Vti1a	128..189	CDD:277244	19/60 (32%)
vti1b	NP_957330.1	V-SNARE	13..90	CDD:461516	19/77 (25%)
		SNARE_Vti1b	130..191	CDD:277243	19/60 (32%)