Protein Alignment Vti1a and Membrin

DIOPT Version :9

• Sequence 1: NP_612053.1
• Gene: Vti1a / 38085
• FlyBaseID: FBgn0260862
• Length: 230
• Species: Drosophila melanogaster
• Sequence 2: NP_647960.1
• Gene: Membrin / 38614
• FlyBaseID: FBgn0260856
• Length: 216
• Species: Drosophila melanogaster
• Alignment Length: 233
• Identity: 49/233 - (21%)
• Similarity: 103/233 - (44%)
• Gaps: 40/233 - (17%)

  Fly     4 LEQYEQQYATLIAEITAHIGRLQQQNNNSERHDLCSKIDSSLPEAQELLEQMGLEVRELNPGLRS 68
            :|....|...::.:|.....||.|. :..|..|:.:.|...:.:|....:::.:.:.::.|..|.
  Fly     1 MESLYHQTNNVVKDIERDFQRLSQL-SAQESLDVENGIQLKITQANANCDRLDVLLYKVPPSQRQ 64

  Fly    69 SFNGKLQVAQA--ELKRLQAEYRLTKDKQRSQANTFTTLDLGDSYEDVSISTDQRQRLLD----- 126
            |  .||:|.|.  :|:.||...:..:::::.:            .:::|    :|::||:
  Fly    65 S--SKLRVDQLKYDLRHLQTSLQTARERRQRR------------MQEIS----EREQLLNHRFTA 111

  Fly   127 NSERIERTGNRLTEGYRVALETE------------QLGAQVLNDLHHQRETLQGARARLRETNAE 179
            ||.:.|.|  ||...|.:...|:            ..|:.:|..|..||.||.||..|::...:.
  Fly   112 NSAQPEET--RLQLDYELQHHTQLGNAHRGVDDMIASGSGILESLISQRMTLGGAHKRIQAIGST 174

  Fly   180 LGRASRTLNTMMLRALREKVVLYGVGVCFVVAVGVSLY 217
            ||.::.|:..:..|.:.::.:..|..|..::.:.:.:|
  Fly   175 LGLSNHTMKLIERRLVEDRRIFIGGVVVTLLIIALIIY 212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vti1a	NP_612053.1	V-SNARE	11..89	CDD:282816	18/79 (23%)
		SNARE_Vti1a	128..189	CDD:277244	20/72 (28%)
Membrin	NP_647960.1	SNARE_GS27	124..188	CDD:277216	15/63 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR21230
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	2.010