DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and RAB18

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_175056.1 Gene:RAB18 / 840987 AraportID:AT1G43890 Length:212 Species:Arabidopsis thaliana


Alignment Length:214 Identity:67/214 - (31%)
Similarity:105/214 - (49%) Gaps:31/214 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGMERVAS 74
            ||:|.||.|||||||...|.:|||   .|...|:|:|...:..::.||::||.:|||.|.||..:
plant    15 KVLLIGDSGVGKSSLLLSFTSNTF---DDLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQERFRT 76

  Fly    75 VTSSYYKFAEGAILVFALDNAASFHSLSQ---HLLDIVTYAENAKIFICGNKSDLDGREPEVSDE 136
            :|||||:.|:|.|:|:.:....:|.:||.   ..:|:.:..::....:.|||.|.:. |..||.:
plant    77 LTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKES-ERAVSKK 140

  Fly   137 EVEAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANRSKMELQALEHKSFQVDTASSG- 200
            |...|..:...|.   .:.|.::...||:.|.:            :.|:.||..|...:.:|.| 
plant   141 EGIDFAREYGCLF---LECSAKTRVNVEQCFEE------------LVLKILETPSLTAEGSSGGK 190

  Fly   201 --------AATNEEDASSC 211
                    |.|....:|.|
plant   191 KNIFKQNPAQTTSTSSSYC 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 57/164 (35%)
RAB18NP_175056.1 PLN03118 1..200 CDD:215587 63/203 (31%)

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