DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and AT5G59840

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_200792.1 Gene:AT5G59840 / 836105 AraportID:AT5G59840 Length:216 Species:Arabidopsis thaliana


Alignment Length:212 Identity:69/212 - (32%)
Similarity:119/212 - (56%) Gaps:22/212 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFA----TNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGME 70
            |::|.||.|||||.|..||:    |.:|||      |:|:|...|...::.|:||||:|||.|.|
plant    17 KLLLIGDSGVGKSCLLLRFSDGSFTTSFIT------TIGIDFKIRTIELDGKRIKLQIWDTAGQE 75

  Fly    71 RVASVTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYA-ENAKIFICGNKSDLDGREPEVS 134
            |..::|::||:.|.|.:||:.:.:.:||:::...:.:|..:| :|....:.|||:|:|..:..|.
plant    76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVP 140

  Fly   135 DEEVEAFCEQCHSLISATYKTSCRSGAGVEEMF----RDISRQLVHANRSKMELQALEHKSFQVD 195
            ..:.:|..::.....   ::||.::...|||:|    :||.::|...: |:.|...:  |..|.|
plant   141 KSKGQALADEYGIKF---FETSAKTNLNVEEVFFSIAKDIKQRLADTD-SRAEPATI--KISQTD 199

  Fly   196 TASSGAATNEEDASSCG 212
            .| :||....:.::.||
plant   200 QA-AGAGQATQKSACCG 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 58/170 (34%)
AT5G59840NP_200792.1 Rab8_Rab10_Rab13_like 13..180 CDD:206659 58/171 (34%)

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