DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and RAB8

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_190929.1 Gene:RAB8 / 824529 AraportID:AT3G53610 Length:216 Species:Arabidopsis thaliana


Alignment Length:214 Identity:66/214 - (30%)
Similarity:119/214 - (55%) Gaps:26/214 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFA----TNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGME 70
            |::|.||.|||||.|..||:    |.:|||      |:|:|...|...::.|:||||:|||.|.|
plant    17 KLLLIGDSGVGKSCLLLRFSDGSFTTSFIT------TIGIDFKIRTIELDGKRIKLQIWDTAGQE 75

  Fly    71 RVASVTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAENA--KIFICGNKSDLDGREPEV 133
            |..::|::||:.|.|.:||:.:.:.:||:::...:.:|..:|.::  ||.: |||:|:|..:..|
plant    76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILV-GNKADMDESKRAV 139

  Fly   134 SDEEVEAFCEQCHSLISATYKTSCRSGAGVEEMF----RDISRQLVHANRSKMELQALEHKSFQV 194
            ...:.:|..::.....   ::||.::...|||:|    :||.::|...:      ...|.::.::
plant   140 PKSKGQALADEYGMKF---FETSAKTNLNVEEVFFSIAKDIKQRLADTD------ARAEPQTIKI 195

  Fly   195 DTASSGAATNEEDASSCGC 213
            :.:..||.|::....|..|
plant   196 NQSDQGAGTSQATQKSACC 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 59/171 (35%)
RAB8NP_190929.1 Rab8_Rab10_Rab13_like 13..180 CDD:206659 59/172 (34%)

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