DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and Rab2a

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001398756.1 Gene:Rab2a / 59021 MGIID:1928750 Length:216 Species:Mus musculus


Alignment Length:158 Identity:65/158 - (41%)
Similarity:92/158 - (58%) Gaps:7/158 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGMERVAS 74
            |.|:.||.|||||.|..:|....|....|  .|:|::...|..:::.||||||:|||.|.|...|
Mouse     8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHD--LTIGVEFGARMITIDGKQIKLQIWDTAGQESFRS 70

  Fly    75 VTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYA-ENAKIFICGNKSDLDGREPEVSDEEV 138
            :|.|||:.|.||:||:.:....:|:.|:..|.|...:: .|..|.:.||||||:.|. ||..||.
Mouse    71 ITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR-EVKKEEG 134

  Fly   139 EAFCEQCHSLISATYKTSCRSGAGVEEM 166
            |||..: |.||  ..:||.::.:.|||:
Mouse   135 EAFARE-HGLI--FMETSAKTASNVEEV 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 65/158 (41%)
Rab2aNP_001398756.1 Required for interaction with PRKCI. /evidence=ECO:0000250 2..19 6/10 (60%)
Rab2 3..158 CDD:206658 63/155 (41%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P61106 37..42 2/4 (50%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P61106 63..72 3/8 (38%)

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