DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and RAB3A

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_002857.1 Gene:RAB3A / 5864 HGNCID:9777 Length:220 Species:Homo sapiens


Alignment Length:208 Identity:62/208 - (29%)
Similarity:107/208 - (51%) Gaps:15/208 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGMERVAS 74
            |:::.|:..|||:|...|:|.::|....  .||:|:|...:....|:|:||||:|||.|.||..:
Human    24 KILIIGNSSVGKTSFLFRYADDSFTPAF--VSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRT 86

  Fly    75 VTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYA-ENAKIFICGNKSDLDGREPEVSDEEV 138
            :|::||:.|.|.||::.:.|..||:::......|.||: :||::.:.|||.|::. |..||.|..
Human    87 ITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMED-ERVVSSERG 150

  Fly   139 EAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANRSKMELQALEHKSFQVDTASSGAAT 203
            ....:.   |....::.|.:....|::.|    .:||.....||. ::|:.....|..|..|...
Human   151 RQLADH---LGFEFFEASAKDNINVKQTF----ERLVDVICEKMS-ESLDTADPAVTGAKQGPQL 207

  Fly   204 NEEDA---SSCGC 213
            :::..   ..|.|
Human   208 SDQQVPPHQDCAC 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 52/162 (32%)
RAB3ANP_002857.1 Rab3 22..186 CDD:206657 54/171 (32%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P63012 49..58 3/10 (30%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P63012 80..96 6/15 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..220 4/25 (16%)

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