DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabX6 and rab1aa

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001313450.1 Gene:rab1aa / 566914 ZFINID:ZDB-GENE-090312-110 Length:201 Species:Danio rerio


Alignment Length:196 Identity:74/196 - (37%)
Similarity:109/196 - (55%) Gaps:11/196 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGMERVAS 74
            |::|.||.|||||.|..|||.:|: |:: ..||:|:|...|...::.|.||||:|||.|.||..:
Zfish    10 KLLLIGDSGVGKSCLLLRFADDTY-TES-YISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRT 72

  Fly    75 VTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYA-ENAKIFICGNKSDLDGREPEVSDEEV 138
            :|||||:.|.|.|:|:.:.:..||:::.|.|.:|..|| ||....:.|||.||..:  :|.|  .
Zfish    73 ITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTK--KVVD--Y 133

  Fly   139 EAFCEQCHSLISATYKTSCRSGAGVEEMF----RDISRQLVHANRSKMELQALEHKSFQVDTASS 199
            .|..|...||.....:||.:|...||:.|    .:|.:::.....:..|...|:..|..|.|:|.
Zfish   134 TAAKEFADSLSIPFLETSAKSSTNVEQAFMTMAAEIKKRMGPGATAGAEKSNLKIHSTPVKTSSG 198

  Fly   200 G 200
            |
Zfish   199 G 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 67/166 (40%)
rab1aaNP_001313450.1 Rab1_Ypt1 7..172 CDD:206661 67/167 (40%)

Return to query results.
Submit another query.