DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and rab4b

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_031746337.1 Gene:rab4b / 549741 XenbaseID:XB-GENE-946075 Length:234 Species:Xenopus tropicalis


Alignment Length:214 Identity:73/214 - (34%)
Similarity:111/214 - (51%) Gaps:20/214 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGMERVAS 74
            |.::.|..|.|||.|..:|..|.|..|::.  |:|::...|..:|..|.:|||:|||.|.||..|
 Frog    31 KFLVIGSAGTGKSCLLHQFIENKFKQDSNH--TIGVEFGSRIVNVGGKSVKLQIWDTAGQERFRS 93

  Fly    75 VTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAE-NAKIFICGNKSDLDGREPEVSDEEV 138
            ||.|||:.|.||:||:.:.:..::::|:..|.|..|.|. |..|.:||||.|||. :.||:..|.
 Frog    94 VTRSYYRGAAGALLVYDIASRETYNALTNWLTDARTLASPNIIIILCGNKKDLDA-DREVTFLEA 157

  Fly   139 EAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANRSKMELQALEHK----SFQVDTASS 199
            ..|.::...:.   .:||..:|..|||.|...:|.::    ||:|...|:.:    ..|...||.
 Frog   158 SRFAQENELMF---LETSALTGENVEEAFLKCARTIL----SKIESGELDPERMWSGIQYGDASP 215

  Fly   200 GAA-----TNEEDASSCGC 213
            ..|     |.:::...|.|
 Frog   216 RHAKHSHGTQQQNRQQCNC 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 61/162 (38%)
rab4bXP_031746337.1 Rab4 30..190 CDD:206696 62/164 (38%)

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