DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and Rab18

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster


Alignment Length:211 Identity:69/211 - (32%)
Similarity:107/211 - (50%) Gaps:27/211 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGMERVAS 74
            |:::.|:.|||||||.|||..|.|  |.:...|:|:|...:...|:....|:.||||.|.||..|
  Fly     7 KLLVIGESGVGKSSLIRRFVENKF--DQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERFRS 69

  Fly    75 VTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAENAK--IFICGNKSDLDGREPEVSDEE 137
            :|.|:|:.|.|||||:.:.:..|...|...|.::.:|::|..  |.:.|||.|   .|..|..||
  Fly    70 LTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKID---EERVVDREE 131

  Fly   138 VEAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANRSKMELQALEHKSFQVDTASSG-- 200
            ...|..:..:|.   .:||.:....|.::|:|:..::|.:            :.|....||:|  
  Fly   132 GRKFARKHRALF---IETSAKCDQFVSDVFKDVVEKIVSS------------EYFNNGNASAGLD 181

  Fly   201 AATN---EEDASSCGC 213
            .|::   |..||:|.|
  Fly   182 IASDRDLEASASTCYC 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 58/163 (36%)
Rab18NP_524744.2 Rab18 6..165 CDD:206656 58/165 (35%)

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