DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and RabX1

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster


Alignment Length:224 Identity:72/224 - (32%)
Similarity:107/224 - (47%) Gaps:16/224 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MRIPKQKVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGG 68
            ||..:.||::.|..||||:.|..|:..||.........|:.:........::|.:||||:|||.|
  Fly     1 MRGIEGKVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAG 65

  Fly    69 MERVASVTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAENAKIF-ICGNKSDLDGREPE 132
            .||..:|...||:.|..|||||.|....:|..:...:.::....::..|. :.|||.|:..:. .
  Fly    66 QERYRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQR-A 129

  Fly   133 VSDEEVEAFCEQCHSLISATY-KTSCRSGAGVEEMFRDISRQLVHANRSKMELQALEHKSFQVDT 196
            ||.||...|.    :.|.||| :||..:..|:|::|...::.||   |...|.::...:|||  :
  Fly   130 VSREEAFVFA----TSIGATYFETSTETDQGLEQVFISTAQGLV---RLADEGKSPSLRSFQ--S 185

  Fly   197 ASSGAATNEEDASSCGCXQL----GNIEF 221
            ..|.|.||...|.|... .|    ||..|
  Fly   186 TDSLAYTNTNTAFSHTVAALARSSGNAAF 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 53/163 (33%)
RabX1NP_524713.1 Rab 7..166 CDD:206640 53/163 (33%)

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