DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and rab11bb

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001002555.1 Gene:rab11bb / 436828 ZFINID:ZDB-GENE-040718-293 Length:218 Species:Danio rerio


Alignment Length:206 Identity:69/206 - (33%)
Similarity:107/206 - (51%) Gaps:17/206 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGMERVAS 74
            ||:|.||.|||||:|..||..|.|  :.:.|||:|::...|...|:.|.||.|:|||.|.||..:
Zfish    13 KVVLIGDSGVGKSNLLSRFTRNEF--NLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75

  Fly    75 VTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAE-NAKIFICGNKSDLDGREPEVSDEEV 138
            :||:||:.|.||:||:.:....::.::.:.|.::..:|: |..|.:.||||||.... .|..:|.
Zfish    76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLR-AVPTDEA 139

  Fly   139 EAFCEQCH-SLISATYKTSCRSGAGVEEMFRDISRQLVHANRSKMELQALEHK--------SFQV 194
            .||.|:.: |.|    :||......|||.|::|..::......|...:...|.        ...|
Zfish   140 RAFAEKNNLSFI----ETSALDSTNVEEAFKNILTEIYRIVSQKQIAERSAHDESPGNNVVDISV 200

  Fly   195 DTASSGAATNE 205
            ...:.|..:|:
Zfish   201 PPTTDGQKSNK 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 64/163 (39%)
rab11bbNP_001002555.1 Rab11_like 9..173 CDD:206660 64/166 (39%)

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