DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and Ras85D

DIOPT Version :9

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_476699.1 Gene:Ras85D / 41140 FlyBaseID:FBgn0003205 Length:189 Species:Drosophila melanogaster


Alignment Length:175 Identity:49/175 - (28%)
Similarity:85/175 - (48%) Gaps:26/175 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGMERVAS 74
            |:::.|..|||||:|..:...|.|:.:.|  .|:. |...::..::.:...|.:.||.|.|..::
  Fly     5 KLVVVGAGGVGKSALTIQLIQNHFVDEYD--PTIE-DSYRKQVVIDGETCLLDILDTAGQEEYSA 66

  Fly    75 VTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTY---------AENAKIFICGNKSDLDGRE 130
            :...|.:..||.:||||:::|.||.       ||.||         ||...:.:.|||.||  ..
  Fly    67 MRDQYMRTGEGFLLVFAVNSAKSFE-------DIGTYREQIKRVKDAEEVPMVLVGNKCDL--AS 122

  Fly   131 PEVSDEEVEAFCEQCHSLISATY-KTSCRSGAGVEEMFRDISRQL 174
            ..|::|:.....:|    ....| :||.::..||::.|..:.|::
  Fly   123 WNVNNEQAREVAKQ----YGIPYIETSAKTRMGVDDAFYTLVREI 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 RAB 10..176 CDD:197555 49/175 (28%)
Rab 10..172 CDD:206640 48/171 (28%)
Ras85DNP_476699.1 H_N_K_Ras_like 3..164 CDD:133338 49/175 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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