DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and rab11ba

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_999935.1 Gene:rab11ba / 406798 ZFINID:ZDB-GENE-040426-2860 Length:218 Species:Danio rerio


Alignment Length:167 Identity:63/167 - (37%)
Similarity:98/167 - (58%) Gaps:9/167 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGMERVAS 74
            :|:|.||.|||||:|..||..|.|  :.:.|||:|::...|...|:.|.||.|:|||.|.||..:
Zfish    13 RVVLIGDSGVGKSNLLSRFTRNEF--NLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75

  Fly    75 VTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAE-NAKIFICGNKSDLDGREPEVSDEEV 138
            :||:||:.|.||:||:.:....::.::.:.|.::..:|: |..|.:.||||||.... .|..:|.
Zfish    76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLR-AVPTDEA 139

  Fly   139 EAFCEQCH-SLISATYKTSCRSGAGVEEMFRDISRQL 174
            .||.|:.: |.|    :||......|||.|::|..::
Zfish   140 RAFAEKNNLSFI----ETSALDSTNVEEAFKNILTEI 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 63/163 (39%)
rab11baNP_999935.1 Rab11_like 9..173 CDD:206660 63/167 (38%)

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