DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and rab35

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_989019.1 Gene:rab35 / 394615 XenbaseID:XB-GENE-489018 Length:201 Species:Xenopus tropicalis


Alignment Length:189 Identity:64/189 - (33%)
Similarity:104/189 - (55%) Gaps:20/189 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTF----ITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGME 70
            |:::.||.|||||||..|||.|||    ||      |:|:|...|...:|.:::|||:|||.|.|
 Frog    10 KLLIIGDSGVGKSSLLLRFADNTFSGSYIT------TIGVDFKIRTVEINGEKVKLQIWDTAGQE 68

  Fly    71 RVASVTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAENAKIFICGNKSDLDGREPE--- 132
            |..::||:||:...|.|:|:.:.:|.||.::.:.|.:|....::....:.|||:|    :||   
 Frog    69 RFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKND----DPERKV 129

  Fly   133 VSDEEVEAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANRSKMELQALEHKS 191
            |..|:...|..|....:   ::||.:....|||||..|:..::.|.:..:..|..:.::
 Frog   130 VETEDAYKFAAQMDIQL---FETSAKENLNVEEMFNCITELVLRAKKDNLAKQQQQQQN 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 62/168 (37%)
rab35NP_989019.1 Rab35 3..201 CDD:133310 64/189 (34%)

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