DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and rab35

DIOPT Version :9

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_989019.1 Gene:rab35 / 394615 XenbaseID:XB-GENE-489018 Length:201 Species:Xenopus tropicalis


Alignment Length:189 Identity:64/189 - (33%)
Similarity:104/189 - (55%) Gaps:20/189 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTF----ITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGME 70
            |:::.||.|||||||..|||.|||    ||      |:|:|...|...:|.:::|||:|||.|.|
 Frog    10 KLLIIGDSGVGKSSLLLRFADNTFSGSYIT------TIGVDFKIRTVEINGEKVKLQIWDTAGQE 68

  Fly    71 RVASVTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAENAKIFICGNKSDLDGREPE--- 132
            |..::||:||:...|.|:|:.:.:|.||.::.:.|.:|....::....:.|||:|    :||   
 Frog    69 RFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKND----DPERKV 129

  Fly   133 VSDEEVEAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANRSKMELQALEHKS 191
            |..|:...|..|....:   ::||.:....|||||..|:..::.|.:..:..|..:.::
 Frog   130 VETEDAYKFAAQMDIQL---FETSAKENLNVEEMFNCITELVLRAKKDNLAKQQQQQQN 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 RAB 10..176 CDD:197555 62/172 (36%)
Rab 10..172 CDD:206640 62/168 (37%)
rab35NP_989019.1 Rab35 3..201 CDD:133310 64/189 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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