DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and rab1ba

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_957436.1 Gene:rab1ba / 394117 ZFINID:ZDB-GENE-040426-873 Length:201 Species:Danio rerio


Alignment Length:166 Identity:62/166 - (37%)
Similarity:98/166 - (59%) Gaps:7/166 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGMERVAS 74
            |::|.||.|||||.|..|||.:|: |:: ..||:|:|...|...::.|.||||:|||.|.||..:
Zfish    10 KLLLIGDSGVGKSCLLLRFADDTY-TES-YISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRT 72

  Fly    75 VTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYA-ENAKIFICGNKSDLDGREPEVSDEEV 138
            :|||||:.|.|.|:|:.:.:..|::::.|.|.:|..|| ||....:.|||.||..:: .|.....
Zfish    73 ITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKK-VVDYTTA 136

  Fly   139 EAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQL 174
            :.|.:   ||.....:||.::...||:.|..::.::
Zfish   137 KEFAD---SLAIPFLETSAKNATNVEQAFMTMAAEI 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 62/162 (38%)
rab1baNP_957436.1 Rab1_Ypt1 7..172 CDD:206661 62/166 (37%)

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