DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and Rab2

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster


Alignment Length:220 Identity:75/220 - (34%)
Similarity:111/220 - (50%) Gaps:31/220 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGMERVAS 74
            |.|:.||.|||||.|..:|....|....|  .|:|::...|..:::.||||||:|||.|.|...|
  Fly     8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHD--LTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRS 70

  Fly    75 VTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYA-ENAKIFICGNKSDLDGREPEVSDEEV 138
            :|.|||:.|.||:||:.:....:|:.|:..|.|...:: .|..|.:.|||||||.|. ||..||.
  Fly    71 ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRR-EVKKEEG 134

  Fly   139 EAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANRSKMELQALEHKSFQVDTASSGAAT 203
            |||..: |.|:  ..:||.|:.|.|||.|         .|.:|...:.::...|.::..::|...
  Fly   135 EAFARE-HGLV--FMETSARTAANVEEAF---------INTAKEIYEKIQEGVFDINNEANGIKI 187

  Fly   204 NEE---------------DASSCGC 213
            .::               .|::.||
  Fly   188 GQQHSPTNPSLPGAGGAAGAANSGC 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 68/162 (42%)
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 75/220 (34%)

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