DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabX6 and Rab14

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_788056.1 Gene:Rab14 / 34840 FlyBaseID:FBgn0015791 Length:239 Species:Drosophila melanogaster


Alignment Length:209 Identity:71/209 - (33%)
Similarity:115/209 - (55%) Gaps:13/209 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGMERVAS 74
            |.|:.||.|||||.|..:|....|:.:...  |:|::...|...|::|:||||:|||.|.||..:
  Fly    37 KYIIIGDMGVGKSCLLHQFTEKKFMANCPH--TIGVEFGTRIIEVDDKKIKLQIWDTAGQERFRA 99

  Fly    75 VTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAE-NAKIFICGNKSDLDGREPEVSDEEV 138
            ||.|||:.|.||::|:.:...::::.||..|.|...... :..||:.||||||:... ||:.||.
  Fly   100 VTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDLESTR-EVTYEEA 163

  Fly   139 EAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLV-HANRSKMELQA----LEHKSFQVD-TA 197
            :.|.::...:.   .:.|..:|..|||.|.:.:|::. :....:::|.|    ::|:..|.. |:
  Fly   164 KEFADENGLMF---LEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNASESGVQHRPSQPSRTS 225

  Fly   198 SSGAATNEEDASSC 211
            .|..||..:|..||
  Fly   226 LSSEATGAKDQCSC 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 59/162 (36%)
Rab14NP_788056.1 Rab14 34..199 CDD:133322 60/167 (36%)

Return to query results.
Submit another query.