DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and Rab14

DIOPT Version :9

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_788056.1 Gene:Rab14 / 34840 FlyBaseID:FBgn0015791 Length:239 Species:Drosophila melanogaster


Alignment Length:209 Identity:71/209 - (33%)
Similarity:115/209 - (55%) Gaps:13/209 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGMERVAS 74
            |.|:.||.|||||.|..:|....|:.:...  |:|::...|...|::|:||||:|||.|.||..:
  Fly    37 KYIIIGDMGVGKSCLLHQFTEKKFMANCPH--TIGVEFGTRIIEVDDKKIKLQIWDTAGQERFRA 99

  Fly    75 VTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAE-NAKIFICGNKSDLDGREPEVSDEEV 138
            ||.|||:.|.||::|:.:...::::.||..|.|...... :..||:.||||||:... ||:.||.
  Fly   100 VTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDLESTR-EVTYEEA 163

  Fly   139 EAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLV-HANRSKMELQA----LEHKSFQVD-TA 197
            :.|.::...:.   .:.|..:|..|||.|.:.:|::. :....:::|.|    ::|:..|.. |:
  Fly   164 KEFADENGLMF---LEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNASESGVQHRPSQPSRTS 225

  Fly   198 SSGAATNEEDASSC 211
            .|..||..:|..||
  Fly   226 LSSEATGAKDQCSC 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 RAB 10..176 CDD:197555 60/167 (36%)
Rab 10..172 CDD:206640 59/162 (36%)
Rab14NP_788056.1 Rab14 34..199 CDD:133322 60/167 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24073
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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