DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and Rab21

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001036321.2 Gene:Rab21 / 3355163 FlyBaseID:FBgn0039966 Length:222 Species:Drosophila melanogaster


Alignment Length:219 Identity:60/219 - (27%)
Similarity:106/219 - (48%) Gaps:28/219 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNE-KQIKLQLWDTGGMERVA 73
            |.:|.|:..|||:||..|:..:.|  :....|||....:.|:.|:.: ::.:|.:|||.|.||..
  Fly    15 KAVLLGEGCVGKTSLVLRYMEDRF--NAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERFH 77

  Fly    74 SVTSSYYKFAEGAILVFALDNAASFHSLSQHLLDI--VTYAENAKIFICGNKSDLDGREPEVSDE 136
            ::...||:.::||:||:.:.:..||..:...:.::  :...|.| :.|.|||:||:.:.....||
  Fly    78 ALGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIA-LIIVGNKTDLEEQRAVTHDE 141

  Fly   137 EVEAFCEQCHSLISATY-KTSCRSGAGVEEMFRDISRQLVHANRSKMELQALEHKSFQVDTASSG 200
            .:     |....:.|.| :||.:...||.|:| ::..||:....|:.:..|...:....||.:  
  Fly   142 AL-----QYARTVGAQYVETSAKENEGVAELF-ELLTQLMLEQLSQRQPDASPLRLQNPDTDN-- 198

  Fly   201 AATNEEDA------------SSCG 212
             ..|.:|:            |.||
  Fly   199 -LNNSDDSEAPDPGDPAGQRSCCG 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 49/165 (30%)
Rab21NP_001036321.2 Rab21 14..176 CDD:133323 51/169 (30%)

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