DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and rab18a

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_996661.1 Gene:rab18a / 325255 ZFINID:ZDB-GENE-030131-3980 Length:205 Species:Danio rerio


Alignment Length:207 Identity:66/207 - (31%)
Similarity:108/207 - (52%) Gaps:21/207 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGMERVAS 74
            |:::.|:.|||||||..||..:||  |.:..:|:|:|...:..:|:..:.||.:|||.|.||..:
Zfish    10 KILIIGESGVGKSSLLLRFTDDTF--DAEIGATIGVDFKVKTLAVDGNRAKLAIWDTAGQERFRT 72

  Fly    75 VTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAENAKI--FICGNKSDLDGREPEVSDEE 137
            :|.|||:.|:|.|||:.:....:|..|...|.::.||.....:  .:.|||.|.|.|  |:..||
Zfish    73 LTPSYYRGAQGVILVYDVSRRETFAKLDNWLSELETYCTRNDLVKMLVGNKIDKDDR--EIEREE 135

  Fly   138 VEAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANRSKMELQALEHKSFQVDTASSGAA 202
            ...|..: ||::  ..::|.::..||:..|.::..:::..    ..|....||       |.|.|
Zfish   136 GLKFARK-HSML--FIESSAKTRDGVQCAFEELVEKILQT----PGLWESMHK-------SRGVA 186

  Fly   203 TNE-EDASSCGC 213
            .:| .::|..||
Zfish   187 LSELSESSQGGC 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 56/163 (34%)
rab18aNP_996661.1 Rab18 9..169 CDD:206656 56/165 (34%)

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