DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and Rab2b

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_063130300.1 Gene:Rab2b / 305853 RGDID:1309117 Length:225 Species:Rattus norvegicus


Alignment Length:212 Identity:69/212 - (32%)
Similarity:108/212 - (50%) Gaps:26/212 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDT-------- 66
            |.|:.||.|||||.|..:|....|....|  .|:|::...|..:::.||||||:|||        
  Rat     8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHD--LTIGVEFGARMVNIDGKQIKLQIWDTNSEPEPSY 70

  Fly    67 --GGMERVASVTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTY-AENAKIFICGNKSDLDG 128
              .|.|...|:|.|||:.|.||:||:.:....:|:.|:..|.|...: :.|..|.:.||||||:.
  Rat    71 LQAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLES 135

  Fly   129 REPEVSDEEVEAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANRSKMELQALEHKSFQ 193
            |. :|..||.|||..: |.||  ..:||.::...|||.:.:.::: :|        :.::...|.
  Rat   136 RR-DVKREEGEAFARE-HGLI--FMETSAKTACNVEEAYINTAKE-IH--------RKIQQGLFD 187

  Fly   194 VDTASSGAATNEEDASS 210
            |...::|.....:.:.|
  Rat   188 VHNEANGIKIGPQQSIS 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 64/172 (37%)
Rab2bXP_063130300.1 None

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