DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and rab-10

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_491857.1 Gene:rab-10 / 266836 WormBaseID:WBGene00004273 Length:201 Species:Caenorhabditis elegans


Alignment Length:205 Identity:68/205 - (33%)
Similarity:110/205 - (53%) Gaps:16/205 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGMERVAS 74
            |::|.||.||||:.:..||:.:.|  :|...||:|:|...:...:..|:||||:|||.|.||..:
 Worm    11 KLLLIGDSGVGKTCILYRFSDDAF--NTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHT 73

  Fly    75 VTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYA-ENAKIFICGNKSDLDGREPEVSDEEV 138
            :|:|||:.|.|.:||:.:.||.||.::::.|.:|..:| |:....|.|||.|:..|. .||.|..
 Worm    74 ITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDRR-VVSRERG 137

  Fly   139 EAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANRSKMELQALEHKSFQVDTASSGAAT 203
            |... |.|.:  :.::||.:....|:..|.|::..::    :||.....|.....|:....    
 Worm   138 EKIA-QDHGI--SFHETSAKLNVHVDTAFYDLAEAIL----AKMPDSTDEQSRDTVNPVQP---- 191

  Fly   204 NEEDASSCGC 213
             :..:||.||
 Worm   192 -QRQSSSGGC 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 60/162 (37%)
rab-10NP_491857.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 60/171 (35%)

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