DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment RabX6 and ypt4

DIOPT Version :9

Sequence 1:	NP_001261219.1	Gene:	RabX6 / 38084	FlyBaseID:	FBgn0035155	Length:	222	Species:	Drosophila melanogaster
Sequence 2:	NP_594796.1	Gene:	ypt4 / 2542113	PomBaseID:	SPAC1B3.11c	Length:	234	Species:	Schizosaccharomyces pombe

Alignment Length:	184	Identity:	69/184 - (37%)
Similarity:	104/184 - (56%)	Gaps:	14/184 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSV----NEKQIKLQLWDTGGME 70
            |::|.|..|.|||.|.:||..|.:  |.....|:|:|...|..||    .:|:||||:|||.|.|
pombe    11 KIVLAGPSGTGKSCLLQRFVKNQW--DDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQE 73

  Fly    71 RVASVTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAENA-KIFICGNKSDLDGREPEVS 134
            :..||..:||:.|.||:||:.:.|..||..||..|.||...|.:. .:.:.|:||||..:. :||
pombe    74 KFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDLQNQR-QVS 137

  Fly   135 DEEVEAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANRSKMELQALE 188
            .||...||.:.|  ||:.::||..:|:.|||.|..:...::    :::||..::
pombe   138 TEEAAEFCSEKH--ISSAHETSSYTGSNVEECFLSVVSTII----TRIELGEID 185

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RabX6	NP_001261219.1	RAB	10..176	CDD:197555	67/170 (39%)
RabX6	NP_001261219.1	Rab	10..172	CDD:206640	67/166 (40%)
ypt4	NP_594796.1	RAB	10..178	CDD:197555	67/175 (38%)
ypt4	NP_594796.1	Rab	10..173	CDD:206640	67/166 (40%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	2	1.870