DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and RAB18

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001243339.1 Gene:RAB18 / 22931 HGNCID:14244 Length:235 Species:Homo sapiens


Alignment Length:199 Identity:61/199 - (30%)
Similarity:94/199 - (47%) Gaps:42/199 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLW---------- 64
            |:::.|:.|||||||..||..:||  |.:..:|:|:|...:..||:..:.||.:|          
Human    10 KILIIGESGVGKSSLLLRFTDDTF--DPELAATIGVDFKVKTISVDGNKAKLAIWVTLHQQTANF 72

  Fly    65 -------------------DTGGMERVASVTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVT 110
                               ||.|.||..::|.|||:.|:|.|||:.:....:|..|...|.::.|
Human    73 FLKSQIGNSPILKWAMWQYDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELET 137

  Fly   111 YAENAKI--FICGNKSDLDGREPEVSDEEVEAFCEQCHSL--ISATYKTSCRSGAGVEEMFRDIS 171
            |.....|  .:.|||.|.:.|  ||...|...|..: ||:  |.|:.|| |   .||:..|.::.
Human   138 YCTRNDIVNMLVGNKIDKENR--EVDRNEGLKFARK-HSMLFIEASAKT-C---DGVQCAFEELV 195

  Fly   172 RQLV 175
            .:::
Human   196 EKII 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 61/194 (31%)
RAB18NP_001243339.1 Rab18 9..198 CDD:206656 61/196 (31%)

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