DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and Dnajc27

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_006515115.1 Gene:Dnajc27 / 217378 MGIID:2443036 Length:298 Species:Mus musculus


Alignment Length:247 Identity:60/247 - (24%)
Similarity:103/247 - (41%) Gaps:60/247 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IPKQ---------KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKL 61
            :||:         |||..|:..||||.:.:|:....|:  :...:|:|:|:...:..|.:::||:
Mouse     5 VPKRKEPAKSLRIKVISMGNAEVGKSCIIKRYCEKRFV--SKYLATIGIDYGVTKVQVRDREIKV 67

  Fly    62 QLWDTGGMERVASVTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVT------YAENAKIFIC 120
            .::|..|......|.:.:||..:|.|||:.:....||.:|...|.::..      ..:|....:|
Mouse    68 NIFDMAGHPFFFEVRNEFYKDTQGVILVYDVGQKDSFDALDSWLAEMKQELGPHGNMDNIVFVVC 132

  Fly   121 GNKSDLDGRE---PEVSDEEVEAFCE-------QC--HSLISAT-------------YKTSCRSG 160
            .||    ||:   |.|..:...:.|.       .|  |..|..:             ::||.::|
Mouse   133 ANK----GRDLTWPGVVGQGGFSLCPALTLFQIDCSKHRCIDESEGRLWAESKGFLYFETSAQTG 193

  Fly   161 AGVEEMFRDISRQLVH--ANRSKMELQALEHKSFQVDTASSGAATNEEDASS 210
            .|:.|||:.....:|.  .|..|.            .||||.|:..:|.|.:
Mouse   194 EGINEMFQTFYLSIVDLCENGGKR------------PTASSSASFTKEQADT 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 48/192 (25%)
Dnajc27XP_006515115.1 RJL 17..209 CDD:133319 48/197 (24%)
DnaJ 242..289 CDD:99751
Blue background indicates that the domain is not in the aligned region.

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