DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and Rab17

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_033024.1 Gene:Rab17 / 19329 MGIID:104640 Length:214 Species:Mus musculus


Alignment Length:205 Identity:58/205 - (28%)
Similarity:94/205 - (45%) Gaps:30/205 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGMERVAS 74
            |::|.|...|||:||..|:....|   ::...|:|.....:...:....:||::|||.|.|:..|
Mouse    21 KLVLLGSSSVGKTSLALRYMKQDF---SNVLPTVGCAFFTKVLDLGSSSLKLEIWDTAGQEKYQS 82

  Fly    75 VTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAENAK--IFICGNKSDLDGREPEVSDEE 137
            |...|::.|..|:||:.:....|||...|.|.|:....:..:  :.:.|||:|| |.|.||:.:|
Mouse    83 VCHLYFRGANAALLVYDITRKDSFHKAQQWLEDLEKEFQPGEVVVMLVGNKTDL-GEEREVTFQE 146

  Fly   138 VEAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANRSKMELQALEHKSFQVDTASS--- 199
            .:.|.|....|.   .:||.:....|.|:|..::::|:..               ..||.||   
Mouse   147 GKEFAESKSLLF---METSAKLNYQVSEIFNTVAQELLQR---------------AGDTGSSRPQ 193

  Fly   200 ---GAATNEE 206
               ..|.|:|
Mouse   194 EGEAVALNQE 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 50/163 (31%)
Rab17NP_033024.1 Rab5_related 21..181 CDD:206653 50/166 (30%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P20339 43..54 3/13 (23%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P20339 75..91 5/15 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..204 7/36 (19%)

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