Protein Alignment RabX6 and raga-1

DIOPT Version :9

• Sequence 1: NP_001261219.1
• Gene: RabX6 / 38084
• FlyBaseID: FBgn0035155
• Length: 222
• Species: Drosophila melanogaster
• Sequence 2: NP_001379077.1
• Gene: raga-1 / 174726
• WormBaseID: WBGene00006414
• Length: 312
• Species: Caenorhabditis elegans
• Alignment Length: 166
• Identity: 44/166 - (26%)
• Similarity: 73/166 - (43%)
• Gaps: 18/166 - (10%)

  Fly     8 KQKVILCGDYGVGKSSLFRRFATNTFITDTDRKS-TLGLDHIDREYSVNEKQIKLQLWDTGGMER 71
            |:||:|.|..|.||:|:......|....|..|.. |:.::|...::..|   :.|.|||.||.|.
 Worm     4 KRKVLLMGKSGSGKTSMRSIIFANYIARDCSRLGPTIEVEHAHVKFLGN---MVLHLWDCGGQES 65

  Fly    72 -----VASVTSSYYKFAEGAILVFALDNAASFHSLSQH---LLDIVTYAENAKIFICGNKSDL-- 126
                 :.|.....:|..:..|.||.:::......|..:   |..::..:.||::|...:|.||
 Worm    66 FMENFLVSQKDQIFKNVQVLIYVFDVESREFEKDLRYYQSCLEALLQNSPNAQVFCLIHKMDLIE 130

  Fly   127 -DGREPEVSDEEVEAFCEQCHSLISATYKTSCRSGA 161
             |.||......|.:..   .:|.::||...:.|:.|
 Worm   131 EDKREETFKRREADVL---RYSELAATPLQNERTNA 163

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RabX6	NP_001261219.1	RAB	10..176	CDD:197555	43/164 (26%)
		Rab	10..172	CDD:206640	43/164 (26%)
raga-1	NP_001379077.1	RagA_like	6..300	CDD:206744	43/164 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910