DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabX6 and Rab2

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_556035.3 Gene:Rab2 / 1276094 VectorBaseID:AGAMI1_012641 Length:213 Species:Anopheles gambiae


Alignment Length:210 Identity:74/210 - (35%)
Similarity:110/210 - (52%) Gaps:16/210 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGMERVAS 74
            |.|:.||.|||||.|..:|....|....|  .|:|::...|..:::.||||||:|||.|.|...|
Mosquito     8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHD--LTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRS 70

  Fly    75 VTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYA-ENAKIFICGNKSDLDGREPEVSDEEV 138
            :|.|||:.|.||:||:.:....:|:.|:..|.|...:: .|..|.:.|||||||.|. ||..||.
Mosquito    71 ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRR-EVKKEEG 134

  Fly   139 EAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANRSKMELQALEHKSFQVDTASSGAAT 203
            |||..: |.|:  ..:||.|:.|.|||.|         .|.:|...:.::...|.::..::|...
Mosquito   135 EAFARE-HGLV--FMETSARTAANVEEAF---------INTAKEIYEKIQEGVFDINNEANGIKI 187

  Fly   204 NEEDASSCGCXQLGN 218
            .::.:.:... ..||
Mosquito   188 GQQHSPTSPSLGSGN 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 68/162 (42%)
Rab2XP_556035.3 PLN03108 1..213 CDD:178655 74/210 (35%)

Return to query results.
Submit another query.