DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and Rab4

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_313105.2 Gene:Rab4 / 1274041 VectorBaseID:AGAMI1_000885 Length:224 Species:Anopheles gambiae


Alignment Length:199 Identity:72/199 - (36%)
Similarity:105/199 - (52%) Gaps:16/199 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGMERVAS 74
            |.::.|..|.|||.|...|..|.|..|:..  |:|::...|..:|..|.||||:|||.|.||..|
Mosquito    10 KFLIIGRAGSGKSCLLHHFIENKFKEDSSH--TIGVEFGSRIVNVGGKSIKLQIWDTAGQERFRS 72

  Fly    75 VTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYA-ENAKIFICGNKSDLDGREPEVSDEEV 138
            ||.|||:.|.||:||:...:..||:.|...|.|..|.| :|..|.:.|||.||: .:.||:..|.
Mosquito    73 VTRSYYRGAAGALLVYDTTSRDSFNVLWNWLNDARTLASQNICILLVGNKKDLE-EDREVTFLEA 136

  Fly   139 EAFCEQCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANRSKMELQALEHKSF-----QVDTAS 198
            ..|.:: :.||  ..:||.::|..|||.|...|:.::    :|:|...|:.:..     ..||::
Mosquito   137 SNFAQE-NELI--FLETSAKTGENVEEAFLKCSKTIL----AKIETGELDPERIGSGIQYGDTSA 194

  Fly   199 SGAA 202
            ..||
Mosquito   195 RNAA 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 64/162 (40%)
Rab4XP_313105.2 Rab4 9..169 CDD:206696 65/164 (40%)

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