DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX6 and zgc:171927

DIOPT Version :10

Sequence 1:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001096112.1 Gene:zgc:171927 / 100124616 ZFINID:ZDB-GENE-070822-21 Length:210 Species:Danio rerio


Alignment Length:218 Identity:77/218 - (35%)
Similarity:111/218 - (50%) Gaps:34/218 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGMERVAS 74
            |::|.||.|||||.|..|||.:|: |:: ..||:|:|...|...:..|.:|||:|||.|.||..:
Zfish    10 KLLLIGDSGVGKSCLLLRFADDTY-TES-YISTIGVDFKIRTIEMEGKTVKLQIWDTAGQERFRT 72

  Fly    75 VTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYA-ENAKIFICGNKSDLDGREPEVSDEEV 138
            :|||||:.|.|.|:|:.:....||:::.|.|.:|..|| ||....:.||||||       |.::|
Zfish    73 ITSSYYRGAHGIIIVYDVTEQESFNNVKQWLEEIDRYACENVSKLLVGNKSDL-------SSKKV 130

  Fly   139 EAF---CEQCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANRSKMELQALEHKSFQVDTASSG 200
            ..|   .|...||.....:||.::...||:.|      |..|:..:..:.|   .|.|.:|...|
Zfish   131 VDFTTAMEFTESLKIPLLETSAKNANNVEKAF------LAMASEIQKRIGA---DSVQNETVKIG 186

  Fly   201 AATNE------------EDASSC 211
            :..|.            |:.|||
Zfish   187 SKINSAPLWPGAEKSVAEEVSSC 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX6NP_001261219.1 Rab 10..172 CDD:206640 65/165 (39%)
zgc:171927NP_001096112.1 Rab1_Ypt1 7..172 CDD:206661 67/176 (38%)

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