DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hiro and scpl42

DIOPT Version :9

Sequence 1:NP_612051.1 Gene:hiro / 38083 FlyBaseID:FBgn0035154 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_199039.1 Gene:scpl42 / 834229 AraportID:AT5G42240 Length:473 Species:Arabidopsis thaliana


Alignment Length:501 Identity:131/501 - (26%)
Similarity:193/501 - (38%) Gaps:121/501 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IIALLALLGFAGLASVDARKGYG--------PGDQDWGF--------VDVRTGAHMFYWLYYTTA 54
            ::.||:|..||        |||.        ||....||        |||:.|..:||  ||..|
plant    14 VVVLLSLQWFA--------KGYPEEDLVVRLPGQPTVGFKQYAGYVDVDVKAGRSLFY--YYVEA 68

  Fly    55 NVSSYTERPLAIWLQGGPGASSTGYGNFEELGPLKLDGSYR-----DWTWVKDMNVMFIDNPVGS 114
             |.....:||.:||.||||.||.|.|.|.||||....|..|     ..:|.|..:::|:::|.|.
plant    69 -VKQPDSKPLTLWLNGGPGCSSIGGGAFTELGPFYPTGDGRGLRVNSMSWNKASHLLFVESPAGV 132

  Fly   115 GFSYVDGSSYYTTNNKQIALDLVELMKGFYTNHPEFKTVPLHIFCESYGGKMAPEFA-LELDYAI 178
            |:||.:.||.|.|.:|..|.|::..:..::...|:.|:..|.:..|||.|...|:.| ..|.|..
plant   133 GWSYSNKSSDYNTGDKSTANDMLVFLLRWFEKFPKLKSRDLFLTGESYAGHYIPQLADAILSYNS 197

  Fly   179 KRGEIESNFVSVALGDPW-----TSPIDSVLSWAPFL----LQLGIVDQDGHDKIEASALKTKDY 234
            .....:.|...||:|:|.     .||......|:..:    |:|.|..|...|          ||
plant   198 HSSGFKFNIKGVAIGNPLLKLDRDSPATYEFFWSHGMISDELKLTITSQCDFD----------DY 252

  Fly   235 VDREKWTQATL---QWSSTQSVVLRESKGVD-FYNVETPTLGDQYRLMSRAA----------MTP 285
            ........:|.   ..|.|::::.......| ..:|..|::..|...:.:.|          ||.
plant   253 TFASPHNVSTACNEAISETENIITEYVNNYDVLLDVCYPSIVQQELRLKKMATKMSMGVDVCMTY 317

  Fly   286 EEVMYRTLVKFDVDEDRDKLLEDLMLGPVTEALGIN---TGVKWGAQSGT-TFTKLMGDF-MKPA 345
            |...|     |::.|             |.:||..|   ....|...||. .::.:.|:. |.|.
plant   318 ERRFY-----FNLPE-------------VQKALHANRTHLPYSWSMCSGVLNYSDIDGNIDMLPI 364

  Fly   346 VDVVGELLNNTTVKVGVFSGGLDLICATPGAVNWIEAM-------------EWSAKPSYQVSPRV 397
            :..:  :||.|  .:.:|||..|.:....|:...:..:             .|..|      .:|
plant   365 LKRI--ILNKT--PIWIFSGDQDSVVPFGGSRTLVRELAQDLNFKTTVPYGAWFHK------SQV 419

  Fly   398 GITVDRVLEGYEKTYGNFSMF-WVNRAGHMVPADNPAAMSHILRHF 442
            |        |:...||....| .|..|.||||...|:...|:...|
plant   420 G--------GWAIEYGKLLTFATVRGAAHMVPYAQPSRALHLFSSF 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hiroNP_612051.1 Peptidase_S10 29..444 CDD:298660 123/470 (26%)
scpl42NP_199039.1 Peptidase_S10 37..460 CDD:278857 123/470 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2939
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54069
OrthoDB 1 1.010 - - D625787at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

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