DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hiro and SCPL34

DIOPT Version :9

Sequence 1:NP_612051.1 Gene:hiro / 38083 FlyBaseID:FBgn0035154 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_851062.2 Gene:SCPL34 / 832385 AraportID:AT5G23210 Length:499 Species:Arabidopsis thaliana


Alignment Length:484 Identity:117/484 - (24%)
Similarity:190/484 - (39%) Gaps:139/484 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GFVDVRT--GAHMFYWLYYTTANVSSYTERPLAIWLQGGPGASSTGYGNFEELGP---------- 87
            |:|.|..  |..:|||.:..|.|.|   ::|:.:||.||||.||.|:|..|||||          
plant    68 GYVTVNETHGRALFYWFFEATQNPS---KKPVLLWLNGGPGCSSIGFGAAEELGPFFPQNSSQPK 129

  Fly    88 LKLDGSYRDWTWVKDMNVMFIDNPVGSGFSYVDGSSYYTTNNKQI-----ALDLVELMKGFYTNH 147
            |||:    .::|.|..|::|:::|||.||||.:.|    .:.||:     |.|....:..::...
plant   130 LKLN----PYSWNKAANLLFLESPVGVGFSYTNTS----RDIKQLGDTVTARDSYNFLVNWFKRF 186

  Fly   148 PEFKTVPLHIFCESYGGKMAPEFALELDYAIKRGEIESNFVSV-------ALGDPWTSPIDSVLS 205
            |::|:...:|..|||.|...|:.: ||.|...:...:.:|:::       ||.|..|.       
plant   187 PQYKSHDFYIAGESYAGHYVPQLS-ELIYKENKIASKKDFINLKGLMIGNALLDDETD------- 243

  Fly   206 WAPFLLQLGIVDQDGHDKIEASAL-----KTKDYVDREKWTQATLQWSSTQSVVLRES------- 258
                  |.|:::......:.:.||     |..|:               .|.:|.:|.       
plant   244 ------QKGMIEYAWDHAVISDALYEKVNKNCDF---------------KQKLVTKECNDALDEY 287

  Fly   259 ----KGVDFYNVETP--------------TLGDQYRLMSRAAMTPEEVMY-----RTLVKFD--V 298
                |.:|.|::..|              ..|::.....|:.:.|..:.:     |....:|  .
plant   288 FDVYKILDMYSLYAPKCVPTSTNSSTSHSVAGNRPLPAFRSILRPRLISHNEGWRRMAAGYDPCA 352

  Fly   299 DEDRDKLL--EDLMLGPVTEALGIN-TGVK--WGAQSGT-TFTKLMGDFMKPAVDVVGELLNNTT 357
            .|..:|.:  :|     |.|||..| |.:.  |...|.| :|.......|.|.:    ..|.:..
plant   353 SEYTEKYMNRKD-----VQEALHANVTNISYPWTHCSDTVSFWSDAPASMLPTL----RTLVSAG 408

  Fly   358 VKVGVFSGGLDLICATPGAVNWIEAMEWSAKPSYQVSPRVGITVDR---------VLEGYEKTYG 413
            ::|.||||..|      |.:. :.|..:|.|       ::|:.:.:         .:.|:...|.
plant   409 LRVWVFSGDTD------GRIP-VTATRYSLK-------KLGLKIVQDWTPWYTKLQVGGWTVEYD 459

  Fly   414 NFSMFWVNRAGHMVPADNPAAMSHILRHF 442
            ......|..|||.||...|.....::.||
plant   460 GLMFVTVRGAGHQVPTFKPREALQLIHHF 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hiroNP_612051.1 Peptidase_S10 29..444 CDD:298660 117/484 (24%)
SCPL34NP_851062.2 Peptidase_S10 56..491 CDD:395361 117/484 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2939
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54069
OrthoDB 1 1.010 - - D625787at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

Return to query results.
Submit another query.