DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hiro and scpl30

DIOPT Version :9

Sequence 1:NP_612051.1 Gene:hiro / 38083 FlyBaseID:FBgn0035154 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_193246.2 Gene:scpl30 / 827176 AraportID:AT4G15100 Length:488 Species:Arabidopsis thaliana


Alignment Length:463 Identity:113/463 - (24%)
Similarity:183/463 - (39%) Gaps:82/463 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PGDQDWGF--------VDVRTGAHMFYWLYYTTANVSSYTERPLAIWLQGGPGASSTGYGNFEEL 85
            ||..|..|        ||...|..:|||.:..   :....|:||.:||.||||.||.|||..:|:
plant    49 PGQPDVSFKHYAGYVPVDKSNGRALFYWFFEA---MDLPKEKPLVLWLNGGPGCSSVGYGATQEI 110

  Fly    86 GPLKLDGS-----YRDWTWVKDMNVMFIDNPVGSGFSYVDGSSYYTTNNKQIA-LDLVELMKGFY 144
            ||...|.:     :..:.|.|::|::|:::|||.||||.:.||.|...:...| .|....:..::
plant   111 GPFLADTNEKGLIFNPYAWNKEVNMLFLESPVGVGFSYSNTSSDYLNLDDHFAKKDAYTFLCNWF 175

  Fly   145 TNHPEFKTVPLHIFCESYGGKMAPEFA-LELDYAIKRGE--IESNFVSVALGDPWTSPIDSVLSW 206
            ...||.|....:|..|||.|...||.| |..|...|..:  :..|.....||:|..|..|....|
plant   176 EKFPEHKGNEFYIAGESYAGIYVPELAELVYDNNEKNNDLSLHINLKGFLLGNPDISNPDDWRGW 240

  Fly   207 APFLLQLGIVDQDGHDKIEASA-LKTKDYVDREKWTQATLQWSSTQSVVLRESKGVDFYNVETPT 270
            ..:.....::..:.|..|.... ..:.|..:.:|..:|..:       |.::...:|.|::.|..
plant   241 VDYAWSHAVISDETHRNINRLCNFSSDDVWNNDKCNEAIAE-------VDKQYNEIDIYSLYTSA 298

  Fly   271 L-GD--------------QYRLMSRAAMTPEEVMYRTLVKFDVDEDRDKLLEDLM-----LGPVT 315
            . ||              .|.:.|: .|.|     |.|..:      |..|:|.:     ...|.
plant   299 CKGDSAKSSYFASAQFKTNYHISSK-RMPP-----RRLAGY------DPCLDDYVKVYYNRADVQ 351

  Fly   316 EALGINTGV---KWGAQSGTTFTKLMGDFMKPAVDVVGELLNNTTVKVGVFSGGLDLICATPGAV 377
            :||..:.||   .|...:...|..  ..::..:|..:.:.|....:::.|:||..|......|..
plant   352 KALHASDGVNLKNWSICNMEIFHN--WTYVVQSVLPIYQKLIAGGLRIWVYSGDTDGCIPVLGTR 414

  Fly   378 NWIEAM------EWSAKPSYQVSPRVGITVDRVLEGYEKTYGNFSMFWVNRAGHMVPADNPAAMS 436
            ..:.|:      .|  :|.|.         ::.:.|:.:.|...:......|||.||:..|::..
plant   415 YSLNALGLPIKTAW--RPWYH---------EKQVSGWVQEYDGLTFATFRGAGHTVPSFKPSSSL 468

  Fly   437 HILRHFTK 444
            ..:..|.|
plant   469 AFISAFVK 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hiroNP_612051.1 Peptidase_S10 29..444 CDD:298660 112/461 (24%)
scpl30NP_193246.2 Peptidase_S10 49..477 CDD:278857 113/463 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2939
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54069
OrthoDB 1 1.010 - - D625787at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

Return to query results.
Submit another query.