DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hiro and scpl28

DIOPT Version :9

Sequence 1:NP_612051.1 Gene:hiro / 38083 FlyBaseID:FBgn0035154 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_181120.2 Gene:scpl28 / 818149 AraportID:AT2G35770 Length:462 Species:Arabidopsis thaliana


Alignment Length:479 Identity:123/479 - (25%)
Similarity:185/479 - (38%) Gaps:86/479 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IIALLALLGFAGLASVDARK-----------GYGPG---DQDWGF--VDVRTGAHMFYWLYYTTA 54
            :||||.:     ::|.||::           |..|.   .|..|:  ||...|..:||||  |.|
plant    17 VIALLDV-----VSSDDAKEQKMKDKIISLPGQPPNLNFSQFSGYVTVDPAAGRALFYWL--TEA 74

  Fly    55 NVSSYTERPLAIWLQGGPGASSTGYGNFEELGPLKL--DGS---YRDWTWVKDMNVMFIDNPVGS 114
            ...|.| :||.:||.||||.||..||..||:||.::  ||.   ...:.|.|..||:|:|:|.|.
plant    75 PRPSGT-KPLVLWLNGGPGCSSIAYGASEEVGPFRVNPDGKTLRLNLYAWNKVANVLFLDSPAGV 138

  Fly   115 GFSYVDGSS-YYTTNNKQIALDLVELMKGFYTNHPEFKTVPLHIFCESYGGKMAPEFA---LELD 175
            ||||.:.|| ..|..:|:...|....:..:....||:|....:|..|||.|...||.|   :..:
plant   139 GFSYTNTSSDELTVGDKRTGEDAYRFLVRWLERFPEYKERAFYIAGESYAGHYIPELAQLIVNRN 203

  Fly   176 YAIKRGEIESNFVSVALGDPWTSPIDSVLSWAPFLLQLGIVDQDGHDKIEASALKTKDYVDREKW 240
            ...|...|  |...:.:|:|.....:.......:....|::..:             .|.|..||
plant   204 KGAKNPTI--NLKGILMGNPLVDDYNDNKGMRDYWWNHGLISDE-------------SYNDLTKW 253

  Fly   241 TQ------ATLQWSSTQSVVLRESKGVDFYNVETPTL-----GDQYRLMSRAAMTPEEVMYRTLV 294
            ..      ..|..::..:..|.|...:|.||:.:|..     .:::....|.....|.|:..|. 
plant   254 CLNDSILFPKLNCNAALNQALSEFGDIDPYNINSPACTTHASSNEWMQAWRYRGNDECVVGYTR- 317

  Fly   295 KFDVDEDRDKLLEDLMLGPVTEALGINTGVKWGAQSGTTFTKLMGDFMKPAVDVVGELLNNTTVK 359
            |:..|.:..|...          ..:|....| ........|...|..|..:.::..|| ...::
plant   318 KYMNDPNVHKSFH----------ARLNGSTPW-TPCSRVIRKNWKDSPKSMLPIIKNLL-QAHLR 370

  Fly   360 VGVFSGGLDLICATPGAVNWIEAMEWSAK----PSYQVSPRVGITVDRVLEGYEKTY--GNFSMF 418
            :.:|||..|.:....|..:.|.||:..:.    |.|.....||        |:.:.|  |..:..
plant   371 IWIFSGDSDAVLPLSGTRHSINAMKLKSSKRWYPWYHSHGLVG--------GWSQVYEDGLLTYT 427

  Fly   419 WVNRAGHMVPADNPAAMSHILRHF 442
            .|..|||.||...|.....:..||
plant   428 TVRAAGHEVPLSQPRLALFLFTHF 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hiroNP_612051.1 Peptidase_S10 29..444 CDD:298660 115/445 (26%)
scpl28NP_181120.2 Peptidase_S10 42..454 CDD:278857 116/449 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2939
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54069
OrthoDB 1 1.010 - - D625787at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

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