DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hiro and Cpvl

DIOPT Version :9

Sequence 1:NP_612051.1 Gene:hiro / 38083 FlyBaseID:FBgn0035154 Length:446 Species:Drosophila melanogaster
Sequence 2:XP_006506676.1 Gene:Cpvl / 71287 MGIID:1918537 Length:484 Species:Mus musculus


Alignment Length:438 Identity:112/438 - (25%)
Similarity:190/438 - (43%) Gaps:63/438 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GPGDQDW-GFVDVRT--GAHMFYWLYYTTANVSSYTERPLAIWLQGGPGASSTGYGNFEELGPLK 89
            |..|:.: |::.|..  .:::|:|.:.......   :.|:.:|||||||.||. :|.|.|.||..
Mouse    76 GMNDKSYAGYITVNQTYNSNLFFWFFPARMQPE---DAPVVLWLQGGPGGSSM-FGLFVEHGPYI 136

  Fly    90 LDGSY----RDWTWVKDMNVMFIDNPVGSGFSYVDGSSYYTTNNKQIALDLVELMKGFYTNHPEF 150
            :..:.    ||:.|...:::::||||||:|||:.|....|.|:...:|.||...:..|:|..||:
Mouse   137 ITSNMTVVARDFPWTFTLSMLYIDNPVGTGFSFTDHFQGYATSEDDVAQDLYSALIQFFTLFPEY 201

  Fly   151 KTVPLHIFCESYGGKMAPEFALELDYAIKRGEIESNFVSVALGDPWTSPIDSVLSWAPFLLQLGI 215
            .....::..|||.||..|..|..:.......:.:.....:|:||.:|.|...:..:|.||.::|:
Mouse   202 AKNDFYVTGESYAGKYVPALAHYIHSLNPVRKFKIRLKGIAIGDAYTDPESIIGGYAAFLYEIGL 266

  Fly   216 VDQDGHDKIEASALKTKDYVDREKWTQA------------TLQWSSTQSVVLRESKGVDFYNVET 268
            :|:......:....|...|:..::|.:|            |...|..|:|    :...::||:..
Mouse   267 LDEQQQKYFQKQCSKCVKYIKEQEWMKAFEILDKLLDGDVTTGSSFFQNV----TGCTNYYNILQ 327

  Fly   269 PTLGDQYRLMSRAAMTPEEVMYRTLVKFDVDEDRDKLLEDLMLGPVTEALGI-NTGVKWGAQSGT 332
            .|             .|:|..|  ..||            |.|..|.:|:.: |.....||:   
Mouse   328 CT-------------EPKEQSY--FAKF------------LTLPQVRQAIHVGNQNFSDGAE--- 362

  Fly   333 TFTKLMGDFMKPAVDVVGELLNNTTVKVGVFSGGLDLICATPGAVNWIEAMEWSAKPSYQVSPRV 397
            ....|..|.:|.....:.|::|  ..||.:::|.||:|.|.......:.||:|....:|:.:.|.
Mouse   363 VEKHLREDTVKSVKPWLSEIMN--YYKVLIYNGQLDIIVAAALTERSLMAMDWKGSRAYRRARRK 425

  Fly   398 GITV---DRVLEGYEKTYGNFSMFWVNRAGHMVPADNPAAMSHILRHF 442
            ...:   |..:.||.:..|.|....|...||::|.|.|.....::..|
Mouse   426 VWKIFKSDNEVAGYVRRVGKFHQVIVRGGGHILPYDQPMRSFDMINRF 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hiroNP_612051.1 Peptidase_S10 29..444 CDD:298660 111/437 (25%)
CpvlXP_006506676.1 Peptidase_S10 78..474 CDD:366108 111/436 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2939
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54069
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R172
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

Return to query results.
Submit another query.