DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ebd1 and CG13894

DIOPT Version :10

Sequence 1:NP_612050.1 Gene:ebd1 / 38082 FlyBaseID:FBgn0035153 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_612054.1 Gene:CG13894 / 38086 FlyBaseID:FBgn0035157 Length:528 Species:Drosophila melanogaster


Alignment Length:521 Identity:111/521 - (21%)
Similarity:187/521 - (35%) Gaps:151/521 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 PDQIKRIVQQRAEILNAWDQRTRRSQDAKTMETKTVRVSMLGKAVYDWIRRMMYYKDF--SISDG 186
            |..::.:.||      |..:...||:          :.:.:...||:|:.|.......  ||:.|
  Fly    85 PSNLEAVEQQ------AMVEEIERSR----------KCAYINAVVYEWLVRANINPQLRGSITHG 133

  Fly   187 LIQKMALQFKSSMNLAHFFPHQEWCDKFRRTYSIQHSDTRLLKIGYTQ----GYSVQIKDIVKDV 247
            :|:..|...:..:....|.....|.::||.|    |......|:...|    |.|:.|.|||:|:
  Fly   134 MIKDKAENARQVIGSTSFIADNRWLNRFRET----HLQGFAQKLASNQLKPLGSSLWIPDIVQDL 194

  Fly   248 MSESMPESGPRNGEEDDEEVSLGSPVSSHPRSYV---------EDEDDEVDVDGGGISGEDDLEE 303
            .....|.|..|..:           :...|..|:         |::||.:||.      |...:|
  Fly   195 AHLFPPASAERVAK-----------LEEMPEQYMTYMQQYGEYEEDDDSMDVK------EQSYQE 242

  Fly   304 EPDVKPSLSELNFARALK-----------PLPPLVRLPLQANTPPGTTQKVLLATPIVPTQAGG- 356
            :...:    :.:||...:           |.||.          ||        .|..||...| 
  Fly   243 QQQQQ----QQHFALQQQHMQQQQHQMGHPWPPF----------PG--------HPGHPTPHPGF 285

  Fly   357 ------------QPMTMTIIPLATLAQSITKIPAPQQQDKGPVVP---PPKLEIKQEKEIKVEPK 406
                        |.|...:.....:.|....:| ||::...|.:|   ||:         :..|.
  Fly   286 ASFNDFYFERHQQQMQQQLQQQQQMQQFPPTMP-PQREPFQPQLPPNVPPQ---------RASPF 340

  Fly   407 DPEELLAKQPEAELQENDDRAQREKDLEIPPTVHIKVEPEAE--LESELDQDPADLDEDANN--G 467
            .|.: |||:|:.|..::|:..:....:..||      .|.||  |.|:..:..:..:::.||  |
  Fly   341 QPVQ-LAKRPKMESPDDDEVQEINSAVNSPP------YPLAESTLTSKHSRSSSPNEQNNNNSGG 398

  Fly   468 RSSVTS-------------LAEVLAANVEDEMEYIEQMRQRKVSSPAAVENSLNPRQGTKRRYES 519
            |.|.:|             ....|::..:|..........:..|:||:.:...|.        .|
  Fly   399 RDSASSKENAPKGGGTSGKSTPALSSKGKDSPAPARAASTKPASAPASPKKIPNG--------SS 455

  Fly   520 AQDDNNNGGSGQESGSSVISCA--------DARKYLKLLEEFALYKENYRLIELITRADEVMREM 576
            :.....||.:..:.......|.        .|.:|||.||:|.|:|||:|.|.|:::.:.|:|:.
  Fly   456 SSGSQTNGHTSPDPEDKKALCMLKELESYHQALEYLKPLEDFVLFKENFRAIGLLSQLELVLRKG 520

  Fly   577 D 577
            |
  Fly   521 D 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ebd1NP_612050.1 CENP-B_N 90..138 CDD:461229 3/13 (23%)
CENPB 158..224 CDD:197828 15/67 (22%)
CG13894NP_612054.1 THAP 6..82 CDD:214951
CENPB 104..165 CDD:197828 14/74 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.