DRSC/TRiP Functional Genomics Resources

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Protein Alignment ebd1 and Tigd3

DIOPT Version :10

Sequence 1:NP_612050.1 Gene:ebd1 / 38082 FlyBaseID:FBgn0035153 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_941036.1 Gene:Tigd3 / 332359 MGIID:2681860 Length:470 Species:Mus musculus


Alignment Length:454 Identity:85/454 - (18%)
Similarity:155/454 - (34%) Gaps:130/454 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 NRIKRKNVLALNEKVAALREYDRLPV-YKHVGRLFNCSPDQIKRIVQQRAEILNAWDQRTRRSQD 150
            |..|:.:.|:|.||:..|...|...: ...|.|.|..|..||.||.:.:.::|..|...|...:.
Mouse     4 NTKKKLHALSLAEKIQVLELLDESKMSQSEVARRFQVSQPQISRICKNKEKLLADWCSGTANHER 68

  Fly   151 AKTMETKTVRVSMLGKAVYDW--IRRMMYYKDFSISDGLIQKMALQFKSSMNLAHFFPHQEWCDK 213
            .:..|:|   .|.:.:|:..|  |.|.   |.:.::..::...|.:....|. ..|.|...|..:
Mouse    69 KRKRESK---YSGIDEALLCWYHIARA---KAWDVTGPMLLHKAKELADIMG-QDFVPSIGWLVR 126

  Fly   214 FRRTYSIQHSDTRLL----------KIGYTQGY-SVQIKDIVKD---------VMSESMPE---- 254
            ::|..::.....::|          .:..:|.. .:.:||...:         ::..::|.    
Mouse   127 WKRRNNVGFGTRQVLVPLFPPEAPPAVLPSQAQPPLSLKDFSPEDVFGCAEVPLLYRAVPGRVFE 191

  Fly   255 ---------SGPRNGEEDDEEVSLGS----------------PVSSHP------RSYVEDEDDEV 288
                     :..|..|:  ..|.:|.                |.|.||      ..::...|.::
Mouse   192 CDRLQVLLCANSRGTEK--RRVFVGGLQAAPRCFFGVSSEALPTSYHPDLAIPWSEWLAQFDQDM 254

  Fly   289 DVDGGGI-----SGEDDLEEEPDVKPSLSELNFARALKPLPPLVRLPLQA-NTPPGTTQKVLLA- 346
            ...|..:     ||   :.||....|.|..:..            |||.| :|.|.....|:|| 
Mouse   255 GQQGRQVALLLASG---VVEEWASLPGLHHVRL------------LPLSASSTTPSLPGSVILAF 304

  Fly   347 ---------TPIVPTQAGGQPMTM-------TII-PLATLAQSITKIP----------------- 377
                     :.:...|:|.:..::       |:: .|..:|.:..|:|                 
Mouse   305 KAHYRHRLLSKLAAMQSGKEGTSLAEARASITVLDALHMVAAAWAKVPRQLILSSFVQEGLAPGK 369

  Fly   378 APQQQDKGPVVPPPKLEIKQEK---EIKVEPKDPEELLAKQPEAELQENDDRAQREKDLEIPPT 438
            .|...||...:.|....:.||:   .:.:|.:||...:.|:...    .:|..:.|...|..||
Mouse   370 TPLSLDKDTEMSPVPSGLSQEEFSHFVDLEDEDPGPRVCKEETG----TEDSGREEDGFEPLPT 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ebd1NP_612050.1 CENP-B_N 90..138 CDD:461229 15/48 (31%)
CENPB 158..224 CDD:197828 12/67 (18%)
Tigd3NP_941036.1 CENP-B_N 6..57 CDD:461229 15/50 (30%)
HTH_Tnp_Tc5 76..133 CDD:460850 12/60 (20%)
DDE_3 193..360 CDD:481203 32/183 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 402..426 5/27 (19%)

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