DRSC/TRiP Functional Genomics Resources

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Protein Alignment ebd1 and tigd3

DIOPT Version :10

Sequence 1:NP_612050.1 Gene:ebd1 / 38082 FlyBaseID:FBgn0035153 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_001128294.1 Gene:tigd3 / 100135169 XenbaseID:XB-GENE-6457180 Length:595 Species:Xenopus tropicalis


Alignment Length:73 Identity:19/73 - (26%)
Similarity:26/73 - (35%) Gaps:15/73 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 GVPEMTNKFIFNISFVNNPDEVSITYGVLDASVTTRMVLNET---GTLQRFRWNGR--DKKWIGF 286
            |:.|:..||:..........|:.   |.|:..||.|....:|   ..:|...|..|  |..|   
 Frog     4 GLIEVERKFLPGPGTEERLQELG---GTLEYRVTFRDTYYDTPELSLMQADHWLRRREDSGW--- 62

  Fly   287 WSAPEDKC 294
                |.||
 Frog    63 ----ELKC 66

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ebd1NP_612050.1 CENP-B_N 90..138 CDD:461229
CENPB 158..224 CDD:197828
tigd3NP_001128294.1 Csa3 18..>138 CDD:442641 15/59 (25%)
CENPB 83..147 CDD:197828
DDE_3 248..421 CDD:481203
Blue background indicates that the domain is not in the aligned region.

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