DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3386 and CG4404

DIOPT Version :10

Sequence 1:NP_612049.1 Gene:CG3386 / 38081 FlyBaseID:FBgn0035152 Length:288 Species:Drosophila melanogaster
Sequence 2:NP_572838.2 Gene:CG4404 / 32241 FlyBaseID:FBgn0030432 Length:308 Species:Drosophila melanogaster


Alignment Length:244 Identity:47/244 - (19%)
Similarity:76/244 - (31%) Gaps:86/244 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 FLALYQGMPELWDVHHLNYRNKELRNRAYELLERKLREIQPNATRTEVGRRINIFRTNYRREQMR 84
            |:...:..|.||:..|..|..||...||::.:...:::...|.            |..:|..:..
  Fly    18 FVQFVENQPCLWNYTHPGYSKKEDVQRAWQQVANDIKDTVRNC------------RERWRTIRSS 70

  Fly    85 ILKQKELGLHSDLCKPTLWFYDYMGFLLTQETFQHRTRKGRGGRQKQDFRREKDDKYPLKN---- 145
            .|:..:|.                           ||:.|||.|           ||.|..    
  Fly    71 FLRSLKLA---------------------------RTQTGRGKR-----------KYYLSKYLQF 97

  Fly   146 --PDLNTESVCDWPI------KDDNAFNYQSEPTAPQSEEGSLLSPKLEIIEPEEGQ----CEVK 198
              |...:.| |...:      |...|...|.|.....:||.:.:|         :|:    .:|.
  Fly    98 LVPFTKSRS-CHKQLPGMVLRKPGQAATAQQEDEVVAAEEEAKVS---------DGEMPLDVQVS 152

  Fly   199 EENSLGNSLETKE-PTS---------SIQTDPENERGTAPMQLSESSEV 237
            ||....|..:.:| ||:         .::.|..|........:|:.|.|
  Fly   153 EEEHRRNQEQDREQPTACLPLRLHSIKVEHDSSNANQQLERMVSQQSLV 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3386NP_612049.1 MADF_DNA_bdg 20..111 CDD:463144 15/90 (17%)
CG4404NP_572838.2 MADF 17..103 CDD:214738 25/134 (19%)
BESS 267..301 CDD:460758
Blue background indicates that the domain is not in the aligned region.

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