DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rev1 and umuC

DIOPT Version :10

Sequence 1:NP_612047.1 Gene:Rev1 / 38079 FlyBaseID:FBgn0035150 Length:995 Species:Drosophila melanogaster
Sequence 2:NP_415702.1 Gene:umuC / 946359 ECOCYCID:EG11056 Length:422 Species:Escherichia coli


Alignment Length:380 Identity:78/380 - (20%)
Similarity:142/380 - (37%) Gaps:80/380 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 DMDCFFVSVGLRTRPELRGLPIAVTHSKGGNAATDVPVHPQADRKAELELFAQRFEHHFHDGDKA 343
            |::.|:.|.....||:|.|.|:.|..:..|....         |.||.:....:.      ||..
E. coli     6 DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIA---------RNAEAKALGVKM------GDPW 55

  Fly   344 EKVRSGFDKKMSLSEIASCSYEAREKGIRNGMFVGQALKLCPELKTIPYDFEGYKEVAFTLYDTV 408
            .|.:..|                |..|:           :|     ...::|.|.:::..:..|:
E. coli    56 FKQKDLF----------------RRCGV-----------VC-----FSSNYELYADMSNRVMSTL 88

  Fly   409 AQYTLNIEAVSCDEMFVELTDLAHELNVDVMAFVSHLRQEVYSKTGCPCSAGVAGNKLLARMATK 473
            .:.:..:|..|.||.|.:||.:.:  ..|:..|...:|..|..:|......|:|..|.||::|..
E. coli    89 EELSPRVEIYSIDEAFCDLTGVRN--CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANH 151

  Fly   474 EAK-----PNGQFLLDSSNDILAYMAPMSLDLLPGVGSSISHKLKQAGLNNCGDVQNTTLEKMEK 533
            .||     ..|...|.:.......|:.:.:|.:.|:|..||.||...|:....|:.:|.:..:.|
E. coli   152 AAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRK 216

  Fly   534 ----VLGKKLGQNLFQNCRGIDDRPLAYEQIRKTVSAEMNFGIRFTNSVECEQFLCQLSEEVTKR 594
                ||.:.:.:...:.|..:::    :...::.:....:||.|.|:.....|.:|..:....::
E. coli   217 HFNVVLERTVRELRGEPCLQLEE----FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEK 277

  Fly   595 LVEIRRKARSIN--LKIMVRAAEAPVETSKYMGHGVC-----------DIINKSS 636
            |....:..|.|:  :|....|...|     |.|:...           ||||.::
E. coli   278 LRSEHQYCRFISTFIKTSPFALNEP-----YYGNSASVKLLTPTQDSRDIINAAT 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rev1NP_612047.1 BRCT_Rev1 39..121 CDD:349351
PolY_Rev1 218..676 CDD:176455 78/380 (21%)
Rev1_C 890..985 CDD:213388
umuCNP_415702.1 umuC 1..422 CDD:179607 78/380 (21%)
Blue background indicates that the domain is not in the aligned region.

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